QTL mapping of drought tolerance at germination stage in wheat using the 50 K SNP array
文献类型: 外文期刊
第一作者: Ren, Yi
作者: Ren, Yi;Zhang, Jianxin;Geng, Hongwei;Liu, Jindong;Xia, Xianchun;Liu, Jindong;Dreisigacker, Susanne
作者机构:
关键词: Drought tolerance coefficient; QTL; SNP markers; Triticum aestivum L
期刊名称:PLANT GENETIC RESOURCES-CHARACTERIZATION AND UTILIZATION ( 影响因子:1.279; 五年影响因子:1.288 )
ISSN: 1479-2621
年卷期: 2021 年 19 卷 5 期
页码:
收录情况: SCI
摘要: Drought is a major concern among abiotic stresses in wheat (Triticum aestivum L.) production. Breeding resistant cultivars are the most effective means to manage drought stress. F6 recombinant inbred lines (RIL) derived from the cross of Berkut/Worrakatta were used to identify quantitative trait loci (QTL) for drought tolerance at germination stage under treatment of PEG6000 using the wheat 50 K single nucleotide polymorphism (SNP) array. Twenty-eight linkage groups were constructed, covering a length of 2220.26 cM. Eighteen QTL were detected based on the drought tolerance coefficients and D-value, explaining 2.7-6.5% of the phenotypic variances, in which 15 were likely to be novel. Three QTL, QGR.xjau-5AS, QCL.xjau-5AS and QD.xjau-5AS for GR, CL and D-value, respectively, at physical positions of 11.70-20.61 Mb between markers AX-111258240 and AX-94458300 on chromosome 5AS accounted for 3.4-4.8% of the phenotypic variances. Three QTL, QGP.xjau-5DL, QSH.xjau-5DL and QD.xjau-5DL for GP, SH and D-value, respectively, were flanked by markers AX-94524442 and AX-110998507 at 560.42-567.39 Mb on chromosome 5DL, accounting for 4.4-6.5% of the phenotypic variances. In addition, the candidate genes TraesCS5A02G022100, TraesCS5B02G014200 and TraesCS5D02G563900 were predicted. Based on transcriptional expression data, the results showed that the expression level of TaGATAs-5A, TaUbox-5B and TaGSTP-5D changed with the increase of treatment time under drought stress in tolerant and sensitive varieties. These are interesting targets in mining drought tolerance genes and the improvement of drought tolerance in wheat.
分类号:
- 相关文献
作者其他论文 更多>>
-
RGB imaging and computer vision-based approaches for identifying spike number loci for wheat
作者:Li, Lei;Wang, Duoxia;Wan, Guoliang;Rasheed, Awais;Xia, Xianchun;Zhang, Yong;He, Zhonghu;Liu, Jindong;Xiao, Yonggui;Li, Lei;Zhang, Yong;Liu, Jindong;Li, Lei;He, Yong;Hassan, Muhammad Adeel;Beegum, Sahila;Hassan, Muhammad Adeel;Beegum, Sahila;Rasheed, Awais;Rasheed, Awais;He, Zhonghu
关键词:Common wheat; Imaging; KASP markers; Quantitative genetic analysis; Spike number
-
Fine mapping and candidate gene analysis of a major QTL for grain length on chromosome 5BS in bread wheat
作者:Zeng, Jianqi;Zhao, Dehui;Yang, Li;Liu, Dan;Tian, Yubing;Wang, Fengju;Cao, Shuanghe;Xia, Xianchun;He, Zhonghu;Zhang, Yong;Zeng, Jianqi;Tian, Yubing;Zhang, Yong;Zhao, Dehui;Yang, Li;Yang, Yufeng;He, Zhonghu;Zhang, Yong
关键词:breeding-friendly marker; candidate gene prediction; fine mapping; grain length; Triticum aestivum L.
-
Genetic resolution of multi-level plant height in common wheat using the 3D canopy model from ultra-low altitude unmanned aerial vehicle imagery
作者:Fei, Shuaipeng;Xiao, Shunfu;Sun, Guangyao;Zhang, Bohan;Ma, Yuntao;Fei, Shuaipeng;Jia, Yidan;Li, Lei;Yang, Shurong;Wang, Duoxia;Zhang, Bohan;Liu, Jindong;Xiao, Yonggui;Jia, Yidan;Wang, Keyi;Ma, Junjie;Song, Jie
关键词:RGB image; 3D reconstruction; UAV photography; Quantitative trait loci; Breeding
-
QTL mapping for leaf rust resistance in a recombinant inbred line population from the cross of wheat cultivars Zhongmai 578/Jimai 22
作者:Zhang, Yue;Tian, Yubing;Cao, Shuanghe;Xia, Xianchun;He, Zhonghu;Zhang, Yan;Zhang, Yong;Liu, Jindong;Li, Lei;He, Zhonghu;Zhang, Yong;Liu, Jindong;Li, Zaifeng;Yang, Fangping;Ni, Yongjing;Zhang, Yong;He, Zhonghu;Li, Lei
关键词:Common wheat; Kompetitive allele-specific PCR (KASP); Leaf rust resistance; Quantitative trait locus (QTL)
-
Deciphering the genetic architecture and regulatory mechanism underlying the accumulation of seed storage proteins in wheat
作者:Che, Rui;Liu, Bingyan;Chao, Yuheng;Bian, Yingjie;Xie, Lina;Li, Lingli;Tian, Wenfei;Xia, Xianchun;He, Zhonghu;Cao, Shuanghe;He, Zhonghu;Cao, Shuanghe
关键词:Genetic machinery; quality; regulatory hierarchy; seed storage protein; transcription regulatory network; wheat
-
Development of functional markers for peroxidase activity genes TaPod-7AS and TaPod-4AL in wheat
作者:Liu, Xinyuan;Cheng, Yukun;Geng, Hongwei;Ren, Yi;Xue, Yating;Cao, Junmei;Bai, Bin
关键词:Functional marker; Grain POD gene; TaPod-7AS; TaPod-4AL; Triticum aestivum
-
Indicators of healthy rhizosphere soils exhibit limited cross-system generalizability under diverse cropping patterns and management strategies
作者:Ren, Yi;Huang, Xinqi;Ren, Yi;Xie, Yi;Yan, Yuanyuan;Li, Ruimin;Su, Hao;Zhou, Xing;Cai, Zucong;Huang, Xinqi;Qu, Jisong;Zhang, Lijuan;Cai, Zucong;Huang, Xinqi;Cai, Zucong;Huang, Xinqi;Cai, Zucong
关键词:Soil health indicators; Watermelon wilt disease; Rhizosphere microbiome; Cross-kingdom interactions; Potassium content; Prediction model