Structural Basis for Selective Oxidation of Phosphorylated Ethylphenols by Cytochrome P450 Monooxygenase CreJ
文献类型: 外文期刊
第一作者: Dong, Sheng
作者: Dong, Sheng;Chen, Jingfei;Wan, Xiaobo;Yao, Li-Shan;Du, Lei;Feng, Yingang;Zhang, Xingwang;Guo, Fei;Ma, Li;You, Cai;Zhang, Wei;Li, Shengying;Du, Lei;Wang, Xiao;Wan, Xiaobo;Liu, Shuang-Jiang;Liu, Shuang-Jiang;Du, Lei;Zhang, Wei;Li, Shengying;Dong, Sheng;Chen, Jingfei;Liu, Shuang-Jiang;Yao, Li-Shan;Feng, Yingang
作者机构:
关键词: cytochrome P450 monooxygenase; ethylphenol; selective oxidation; crystal structure; molecular dynamics
期刊名称:APPLIED AND ENVIRONMENTAL MICROBIOLOGY ( 影响因子:4.792; 五年影响因子:5.26 )
ISSN: 0099-2240
年卷期: 2021 年 87 卷 11 期
页码:
收录情况: SCI
摘要: Selective oxidation of C-H bonds in alkylphenols holds great significance for not only structural derivatization in pharma- and biomanufacturing but also biological degradation of these toxic chemicals in environmental protection. A unique chemomimetic biocatalytic system using enzymes from a p-cresol biodegradation pathway has recently been developed. As the central biocatalyst, the cytochrome P450 monooxygenase CreJ oxidizes diverse p- and m-alkylphenol phosphates with perfect stereoselectivity at different efficiencies. However, the mechanism of regioand stereoselectivity of this chemomimetic biocatalytic system remained unclear. Here, using p- and m-ethylphenol substrates, we elucidate the CreJ-catalyzed key steps for selective oxidations. The crystal structure of CreJ in complex with m-ethylphenol phosphate was solved and compared with its complex structure with p-ethylphenol phosphate isomer. The results indicate that the conformational changes of substrate-binding residues are slight, while the substrate promiscuity is achieved mainly by the available space in the catalytic cavity. Moreover, the catalytic preferences of regio- and stereoselective hydroxylation for the two ethylphenol substrates is explored by molecular dynamics simulations. The ethyl groups in the complexes display different flexibilities, and the distances of the active oxygen to Hpro-S and Hpro-R of methylene agree with the experimental stereoselectivity. The regioselectivity can be explained by the distances and bond dissociation energy. These results provide not only the mechanistic insights into CreJ regio- and stereoselectivity but also the structural basis for further P450 enzyme design and engineering. IMPORTANCE The key cytochrome P450 monooxygenase CreJ showed excellent regio- and stereoselectivity in the oxidation of various alkylphenol substrates. C-H bond functionalization of these toxic alkylphenols holds great significance for both biological degradation of these environmental chemicals and production of value-added structural derivatives in pharmaceutical and biochemical industries. Our results, combined with in vitro enzymatic assays, crystal structure determination of enzyme-substrate complex, and molecular dynamics simulations, provide not only significant mechanism elucidation of the regio- and stereoselective catalyzation mediated by CreJ but also the promising directions for future engineering efforts of this enzyme toward more useful products. It also has great extendable potential to couple this multifunctional P450 enzyme with other biocatalysts (e.g., hydroxyl-based glycosylase) to access more alkylphenol-derived high-value chemicals through environment-friendly biocatalysis and biotransformation.
分类号:
- 相关文献
作者其他论文 更多>>
-
Analysis of the steady-state concentrations of reactive species and their role in contaminant degradation by the iron-biochar/persulfate advanced oxidation process: Comparison of probe compound and quenching agent methods
作者:Meng, Xukun;Peng, Guilong;Yan, Yuting;Wang, Xiao;Zhu, Jiangwei;Belver, Carolina;Gong, Wenwen;Blaney, Lee;Peng, Guilong
关键词:Reactive species; Persulfate; Steady-state concentration; Iron-biochar; Advanced oxidation processes
-
Unraveling novel antioxidant peptides from Asian swamp eel: Identification, in silico selection, and mechanistic insights through quantum chemical calculation and molecular docking
作者:Wang, Xiao;Fu, Juan;Chen, Bingjie;Liu, Hongru;Wu, Songheng;He, Hui;Wang, Qiankun;Qiao, Yongjin;Zhou, Wenzong;Bhullar, Khushwant S.;Su, Di
关键词:Asian swamp eel; Antioxidant activity; In silico selection; Quantum chemistry calculation; Molecular docking
-
In-situ structural modification on spinel oxide to achieve efficient removal of refractory organics: Triple optimisation of degradation performance
作者:Chen, Yaoning;Zhou, Wencheng;Kang, Huayue;Zhao, Mengyang;Wang, Jun;Zhao, Chen;Zou, Bin;Jia, Xuyang;Chen, Yaoning;Zhou, Wencheng;Kang, Huayue;Zhao, Mengyang;Wang, Jun;Zhao, Chen;Zou, Bin;Jia, Xuyang;Li, Yuanping;Zhang, Wei;Liu, Yihuan
关键词:Spinel oxide; Photocatalysis; Heterogeneous structures; Oxygen vacancies; Peroxymonosulfate
-
Variation in microbial communities and network ecological clusters driven by soil organic carbon in an inshore saline soil amended with hydrochar in Yellow River Delta, China
作者:Yao, Hui;Cheng, Yadong;Kong, Qingxian;Wang, Xiao;You, Xiangwei;Li, Yiqiang;Yao, Hui;Cheng, Yadong;Wang, Xiao;You, Xiangwei;Li, Yiqiang;Rong, Ziguo;Quan, Yue;Zheng, Hao
关键词:Soil carbon; Hydrochar; Soil microorganism; Ecological cluster; Coastal salt-affected soil; Soil health
-
Development and clinical validation of photochemical biosensors for monitoring hemoglobin, blood lipids and uric acid in plateau areas
作者:Yu, Bo;Xiang, Xiaoyan;Quda, Danzeng;Zhuoga, Gasong;Liu, Zhijuan;Shi, Li;Li, Qiuping;Zhang, Wei;Huang, Qiong;Cheng, Jie;Guo, Jinhong;Cheng, Jie;Guo, Jinhong
关键词:
-
Functionalization of sawdust biochar using Mg-Fe-LDH and sodium dodecyl sulfonate enhanced its stability and immobilization capacity for Cd and Pb in contaminated water and soil
作者:Pan, Xin;Kuang, Shaoping;Wang, Xiao;Ullah, Habib;Rao, Zepeng;Ali, Esmat F.;Abbas, Qumber;Lee, Sang Soo;Shaheen, Sabry M.
关键词:Soil amendment; Heavy metal; Hydrotalcite; Surface modification; Environmental resistance
-
Ethanol inhibited growth hormone receptor-mediated endocytosis in primary mouse hepatocytes
作者:Ge, Zihan;Liu, Xingjie;Zhang, Wei;Xian, Li;Li, Ruonan;Ge, Zihan;Yang, Yu;Lan, Hainan;Zhang, Yawen
关键词:growth hormone; growth hormone receptor; ethanol; nuclear translocation; endocytosis