Physiological and Transcriptomic Analyses Reveal the Effects of Carbon-Ion Beam on Taraxacum kok-saghyz Rodin Adventitious Buds
文献类型: 外文期刊
作者: Chen, Xia 1 ; Du, Yan 1 ; Luo, Shanwei 3 ; Qu, Ying 1 ; Jin, Wenjie 1 ; Liu, Shizhong 4 ; Wang, Zhuanzi 1 ; Liu, Xiao 1 ; Feng, Zhuo 1 ; Qin, Bi 4 ; Zhou, Libin 1 ;
作者机构: 1.Chinese Acad Sci, Inst Modern Phys, Biomed Ctr, Biophys Grp, Lanzhou 730000, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
3.Guangdong Acad Agr Sci, Vegetable Res Inst, Guangdong Key Lab New Technol Res Vegetables, Guangzhou 510640, Peoples R China
4.Chinese Acad Trop Agr Sci, Rubber Res Inst, Haikou 571101, Peoples R China
关键词: Taraxacumkok-saghyz; adventitious buds; carbon-ion beam; physiological response; transcriptome
期刊名称:INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES ( 影响因子:5.6; 五年影响因子:6.2 )
ISSN: 1661-6596
年卷期: 2023 年 24 卷 11 期
页码:
收录情况: SCI
摘要: Taraxacum kok-saghyz Rodin (TKS) has great potential as an alternative natural-rubber (NR)-producing crop. The germplasm innovation of TKS still faces great challenges due to its self-incompatibility. Carbon-ion beam (CIB) irradiation is a powerful and non-species-specific physical method for mutation creation. Thus far, the CIB has not been utilized in TKS. To better inform future mutation breeding for TKS by the CIB and provide a basis for dose-selection, adventitious buds, which not only can avoid high levels of heterozygosity, but also further improve breeding efficiency, were irradiated here, and the dynamic changes of the growth and physiologic parameters, as well as gene expression pattern were profiled, comprehensively. The results showed that the CIB (5-40 Gy) caused significant biological effects on TKS, exhibiting inhibitory effects on the fresh weight and the number of regenerated buds and roots. Then,15 Gy was chosen for further study after comprehensive consideration. CIB-15 Gy resulted in significant oxidative damages (hydroxyl radical (OH center dot) generation activity, 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical-scavenging activity and malondialdehyde (MDA) content) and activated the antioxidant system (superoxide dismutase (SOD), catalase (CAT), peroxidase (POD), and ascorbate peroxidase (APX)) of TKS. Based on RNA-seq analysis, the number of differentially expressed genes (DEGs) peaked at 2 h after CIB irradiation. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis revealed that DNA-replication-/repair- (mainly up-regulated), cell-death- (mainly up-regulated), plant-hormone-(auxin and cytokinin, which are related to plant morphogenesis, were mainly down-regulated), and photosynthesis- (mainly down-regulated) related pathways were involved in the response to the CIB. Furthermore, CIB irradiation can also up-regulate the genes involved in NR metabolism, which provides an alternative strategy to elevate the NR production in TKS in the future. These findings are helpful to understand the radiation response mechanism and further guide the future mutation breeding for TKS by the CIB.
- 相关文献
作者其他论文 更多>>
-
A novel Pik allele confers extended resistance to rice blast
作者:Qi, Zhongqiang;Du, Yan;Yu, Junjie;Song, Tianqiao;Pan, Xiayan;Zhang, Rongsheng;Cao, Huijuan;Yu, Mina;Liu, Yongfeng;Qi, Zhongqiang;Zhou, Bo;Liu, Yongfeng;Meng, Xiuli;Lu, Guodong;Meng, Xiuli;Telebanco-Yanoria, Mary Jeanie;Zhou, Bo;Meng, Xiuli;Xu, Ming
关键词:AvrPik; BSA-seq; Oryza rufipogon; Pik-W25
-
Identification and Characterization of the HbPP2C Gene Family and Its Expression in Response to Biotic and Abiotic Stresses in Rubber Tree
作者:Liu, Qifeng;Zhang, Dong;Liang, Xiaoyu;Yang, Ye;Wang, Meng;Zhang, Yu;Qin, Bi;Wang, Lifeng;Qin, Bi;Wang, Lifeng
关键词:HbPP2C; rubber tree; bioinformatics; expression analysis
-
Functional characterization of powdery mildew resistance-related genes HbSGT1a and HbSGT1b in Hevea brasiliensis Muell. Arg.
作者:Wang, Meng;Xiao, Huaxing;Yang, Ye;Yu, Haiyang;Zhang, Yu;Li, Xiaona;Wan, Sanlian;Qin, Bi;Qin, Bi
关键词:Rubber tree; HbSGT1; Powdery mildew; Abiotic stress; Hormone signalling
-
Genome-Wide Identification of MADS-Box Genes in Taraxacum kok-saghyz and Taraxacum mongolicum: Evolutionary Mechanisms, Conserved Functions and New Functions Related to Natural Rubber Yield Formation
作者:Chen, Jiaqi;Yang, Yushuang;Li, Chuang;Chen, Qiuhui;Liu, Shizhong;Qin, Bi;Chen, Jiaqi;Li, Chuang
关键词:MADS-box gene; Taraxacum kok-saghyz; Taraxacum mongolicum; collinearity; biomass; natural rubber biosynthesis
-
Characterization of 33 HbbZIP Gene Family Members and Analysis of Their Expression Profiles in Rubber Tree in Response to ABA, Glyphosate and Powdery Mildew Treatment
作者:Wang, Meng;Wang, Yan;Zhang, Dong;Liu, Qifeng;Liu, Yanchao;Liang, Xiaoyu;Zhang, Yu;Qin, Bi;Wang, Lifeng;Qin, Bi;Wang, Lifeng
关键词:HbbZIPs; Hevea brasiliensis (Willd; ex A; Juss; ) Mull; Arg; ABA; glyphosate; powdery mildew
-
Construction of the first high-density SNP genetic map and identification of QTLs for the natural rubber content in Taraxacum kok-saghyz Rodin
作者:Yang, Yushuang;Qin, Bi;Chen, Qiuhui;Liu, Shizhong;Nie, Qiuhai;Zhang, Jichuan;Zhang, Liqun
关键词:Taraxacum kok-saghyz Rodin; Natural rubber content; Genetic map; Single nucleotide polymorphism; Quantitative trait locus; Whole-genome resequencing
-
Single-cell transcriptomic analyses reveal cellular and molecular patterns of rubber tree response to early powdery mildew infection
作者:Liang, Xiaoyu;Ma, Zhan;Ke, Yuhang;Wang, Jiali;Tang, Chaorong;Liu, Mingyang;Xian, Xuemei;Yang, Ye;Wang, Meng;Zhang, Yu;Wang, Lifeng;Qin, Bi
关键词:HbCNL2; Hevea brasiliensis; infection response; protein interaction; single-cell atlas