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Resequencing-based QTL mapping of girth and rubber yield traits in a full-sib rubber tree population GT1 x CATAS8-79

文献类型： 外文期刊

作者： Zhang, Yuanyuan 1 ; Tan, Yingchao 1 ; Xing, Jianfeng 1 ; Liu, Xiaodong 4 ; Zeng, Xia 4 ; Li, Weiguo 4 ; Wu, Yaoting 1 ; Zhang, Shengmin 1 ; Qi, Jiyan 1 ; Li, Zhonghua 1 ; Wang, Jiang 1 ; Cao, Jie 1 ; Tang, Chaorong 1 ; Liu, Kaiye 1 ;

作者机构： 1.Hainan Univ, Sanya Inst Breeding & Multiplicat, Sch Breeding & Multiplicat, Natl Key Lab Trop Crop Breeding, Sanya 572025, Peoples R China

2.Hainan Univ, Sch Trop Agr & Forestry, Haikou 570228, Peoples R China

3.Hainan Univ, Nat Rubber Cooperat Innovat Ctr Hainan Prov & Mini, Haikou 570228, Peoples R China

4.Chinese Acad Trop Agr Sci CATAS, Rubber Res Inst, Danzhou 571101, Hainan, Peoples R China

关键词： Hevea brasiliensis; Genetic map; Girth and rubber yield; Resequencing; QTL mapping

期刊名称：INDUSTRIAL CROPS AND PRODUCTS （ 影响因子：6.2； 五年影响因子：6.2 ）

ISSN： 0926-6690

年卷期： 2024 年 222 卷

页码：

收录情况： SCI

摘要： Rubber tree (Hevea brasiliensis) provides the sole commercial source of natural rubber, a crucial industrial raw material. Rubber yield and girth are widely considered as the most important agronomic traits of rubber tree. However, due to the delayed initiation of rubber tree research, the identification of quantitative trait loci (QTLs) and candidate genes for these traits remains limited. Here, QTL mapping analysis was conducted on the fullsibling progeny population derived from a cross between the clones of GT1 and CATAS8-79. Phenotypes of girth, dry rubber yield (DRY) and yield per centimeter girth (YCG) were measured annually for four consecutive years. Meanwhile, the resequencing of 238 offspring individuals identified 29,140,529 high-confidence SNPs, which resulted in the generation of 3147 non-redundant bin markers. Based on these bin markers, 18 highdensity linkage groups were constructed, with an average genetic distance ranging from 1.49 to 4.96 cM. Subsequently, a total of 37 environmentally stable QTLs were identified comprising 8 for girth, 16 for DRY, and 13 for YCG. These QTLs explained phenotypic variances spanning from 0.32 % to 17.71 %. The two most reliable QTLs, namely QGirth-4 and QGirth-7.2, were further investigated and 21 candidate genes were identified. Based on transcriptome sequencing and homologous annotation, a gibberellin receptor gene (GIBBERELLIN-INSENSITIVE DWARF1, GID1) was determined as the promising candidate for QGirth-7.2. Overexpression of HbGID1 led to early flowering and increased rosette-leaf branches in Arabidopsis, implying its significant role in girth development. These findings provide valuable insights into QTLs and target genes for enhancing growth and rubber yield traits, thereby contributing to molecular breeding of elite latex-timber rubber tree clones.

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