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Chromosome-level genome assembly of the Adonis ladybird Hippodamia variegata

文献类型: 外文期刊

作者: Liu, Hong-Ling 1 ; Yong, Yan-Ping 1 ; Wu, Xing-Long 1 ; Chen, Zhi-Teng 2 ; Wei, Shu-Jun 3 ; Cai, Peng 4 ; Pu, De-Qiang 1 ;

作者机构: 1.Sichuan Acad Agr Sci, Inst Plant Protect, Chengdu 610066, Peoples R China

2.Jiangsu Univ Sci & Technol, Sch Grain Sci & Technol, Zhenjiang 212004, Peoples R China

3.Beijing Acad Agr & Forestry Sci, Inst Plant & Environm Protect, Beijing 100097, Peoples R China

4.Sichuan Acad Agr Sci, Hort Inst, Vegetable Germplasm Innovat & Variety Improvement, Chengdu 610066, Peoples R China

期刊名称:SCIENTIFIC DATA ( 影响因子:6.9; 五年影响因子:8.7 )

ISSN:

年卷期: 2025 年 12 卷 1 期

页码:

收录情况: SCI

摘要: The Adonis ladybird (Hippodamia variegata), an important predator in agricultural ecosystems, plays a crucial role in biological control and is a significant model for evolutionary and genomic studies within Coccinellidae. Despite its ecological importance, the lack of a reference genome for H. variegata has limited in-depth investigations into its biology and potential as a biocontrol agent. Here, we present a high-quality, chromosome-level genome assembly of H. variegata. The final assembly spans 493.01 Mb, with a scaffold N50 of 28.19 Mb and a GC content of 36.41%. Hi-C sequencing data enabled the anchoring of 343.20 Mb to 10 chromosomes. Repetitive elements accounted for 258.56 Mb (52.44%) of the genome, with long interspersed nuclear elements (LINEs) being the most prevalent. We identified 37,348 protein-coding genes, of which 78.55% were functionally annotated in public protein databases. This high-quality genome assembly will serve as a valuable resource for furthering our understanding of Adonis ladybird's evolutionary biology, enhancing its utility in pest management, and supporting future research on ladybird genomics.

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