文献类型： 外文期刊

作者： Liang, Yuwei ¹ ; Gao, Qiang ¹ ; Li, Fan ² ; Du, Yunpeng ⁴ ; Wu, Jian ⁵ ; Pan, Wenqiang ⁴ ; Wang, Shaokun ⁵ ; Zhang, Xiuhai ⁴ ; Zhang, Mingfang ⁴ ; Song, Xiaoming ⁶ ; Zhong, Linlin ⁷ ; Zhang, Fan ⁷ ; Li, Yan ⁸ ; Wang, Zhiwei ⁸ ; Li, Danqing ⁹ ; Duan, Qing ² ; Li, Shenchong ² ; Jin, Chunlian ² ; Zhang, Peihua ² ; Gu, Yang ¹⁰ ; Chen, Zhong-Hua ¹¹ ; Mayer, Klaus F. X. ¹³ ; Zhou, Xiaofan ¹⁵ ; Wang, Jihua ² ; Zhang, Liangsheng ¹ ;

作者机构： 1.Zhejiang Univ, Zhejiang Key Lab Hort Crop Qual Improvement, Hangzhou, Peoples R China

2.Yunnan Seed Lab, Kunming, Peoples R China

3.Yunnan Acad Agr Sci, Floriculture Res Inst, Natl Engn Res Ctr Ornamental Hort, Key Lab Flower Breeding Yunnan Prov, Kunming, Peoples R China

4.Beijing Acad Agr & Forestry Sci, Inst Grassland Flowers & Ecol, Beijing, Peoples R China

5.Agr Univ, Dept Ornamental Hort, Beijing Key Lab Dev & Qual Control Ornamental Crop, Beijing, Peoples R China

6.North China Univ Sci & Technol, Coll Life Sci, Ctr Genom & Biocomp, Tangshan, Peoples R China

7.Huazhong Agr Univ, Natl Key Lab Germplasm Innovat & Utilizat Hort Cro, Wuhan, Peoples R China

8.Qi Biodesign, Beijing, Peoples R China

9.Zhejiang Sci Tech Univ, Sch Civil Engn & Architecture, Dept Landscape Architecture, Hangzhou, Peoples R China

10.Yunnan Agr Univ, Coll Food Sci & Technol, Kunming, Peoples R China

11.Western Sydney Univ, Sch Sci, Penrith, NSW, Australia

12.Western Sydney Univ, Hawkesbury Inst Environm, Penrith, NSW, Australia

13.Helmholtz Ctr Munich, German Res Ctr Environm Hlth, Plant Genome & Syst Biol, Neuherberg, Germany

14.Tech Univ Munich, Sch Life Sci, Munich, Germany

15.South China Agr Univ, Integrat Microbiol Res Ctr, State Key Lab Conservat & Utilizat Subtrop Agrobio, Guangdong Prov Key Lab Microbial Signals & Dis Con, Guangzhou, Peoples R China

16.Yazhouwan Natl Lab, Sanya, Peoples R China

17.Zhejiang A&F Univ, State Key Lab Subtrop Silviculture, Hangzhou, Peoples R China

期刊名称：NATURE COMMUNICATIONS （ 影响因子：15.7； 五年影响因子：17.2 ）

ISSN：

年卷期： 2025 年 16 卷 1 期

页码：

收录情况： SCI

摘要： Lilies are economically important monocots known for their ornamental flowers, bulbs, and large genomes. The absence of their genomic information has impeded evolutionary studies and genome-based breeding efforts. Here, we present reference genomes for Lilium sargentiae (lily, 35.66 Gb) and Gloriosa superba (flame lily, 5.09 Gb). The giant lily genome is shaped by recent long terminal repeat retroelements. Phylogenetic analysis reveals diverse, independent origins of lily cultivars. Gene families involved in sucrose and starch metabolism are significantly expanded in the lily genome. Key homologs of XTH22, SOC1, and AP1/FUL-like genes regulate the development, bud growth transition, and floral bud growth transition of lily bulbs. Colchicine biosynthetic gene clusters are identified in G. superba but are absent in L. sargentiae, highlighting independent colchicine evolution in Colchicaceae. These genomic insights enhance understanding of Liliales evolution, providing a foundation for future breeding and molecular research.