Characterization of sacbrood virus and its infection in Apis cerana in the Qiandao Lake region in Zhejiang Province, China
文献类型： 外文期刊
作者： Dong, Jie 1 ; Guo, Rui 1 ; Huang, Minjie 1 ; Wang, Deqian 1 ; Huang, Jiaxing 2 ;
作者机构： 1.Zhejiang Acad Agr Sci, Inst Anim Husb & Vet Sci, Hangzhou 310021, Peoples R China
2.Chinese Acad Agr Sci, Inst Apicultural Res, Key Lab Insect Pollinator Biol, Minist Agr & Rural Affairs, Beijing 100093, Peoples R China
关键词： Apis cerana; CSBV; Capsid protein; Complete genome sequence; Phylogenetic analysis
期刊名称：JOURNAL OF ASIA-PACIFIC ENTOMOLOGY （ 影响因子：1.303； 五年影响因子：1.427 ）
ISSN： 1226-8615
年卷期： 2020 年 23 卷 1 期
页码：
收录情况： SCI
摘要： Chinese sacbrood virus (CSBV) is a disastrous virus that fatally threatens honeybees (Apis cerana) in China. Here, we identified the complete genome of CSBV using the rapid amplification of cDNA ends (RACE) method and compared the obtained sequences with those of other SBVs through multiple sequence alignment. The results showed that the full-length of CSBV genome from Zhejiang Province (CSBV-ZJ) is 8824 bp and contains a single, large open reading frame (ORF) that encodes 2842 amino acids flanked by 190 nucleotides (nts) of the 5'-untranslated region (UTR) and 108 nts of the 3'-UTR. The multiple genome comparison showed that SBVs have five conserved domains and that CSBV-ZJ belong to SBV type II. The phylogenetic analysis demonstrated that the CSBV-ZJ strain was similar to the CSBV from Fuzhou (CSBV-FZ) strain. Colonies collected from most of the sampling sites in the area surrounding Qiandao Lake were carriers of CSBV. The haplotypes of the VP1 gene formed a network with radiated and reticular structures. In conclusion, this characterization of the CSBV-ZJ genome will help us understand the SBV prevalence mechanism and aid the protection of honeybees.
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