The complete chloroplast genome of Cucumis melo L. 'Shengkaihua' (Cucurbitaceae) and its phylogenetic implication
文献类型： 外文期刊
作者： Cheng, Hong 1 ; Kong, Wei-Ping 1 ; Zhang, Min-Min 3 ; Hou, Dong 1 ;
作者机构： 1.Gansu Acad Agr Sci, Vegetable Res Inst, Lanzhou 730070, Peoples R China
2.Minist Agr & Rural Affairs, Key Lab Fruit Breeding Technol, Zhengzhou, Peoples R China
3.Gansu Acad Agr Sci, Inst Biotechnol, Lanzhou, Peoples R China
关键词： Cucumis melo L; 'Shengkaihua'; complete chloroplast genome; phylogenetic analysis; Cucurbitaceae
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2020 年 5 卷 2 期
页码：
收录情况： SCI
摘要： The genus Cucumis contains 52 species, including two economically significant crops, cucumber, and melon, as well as some important landraces. Cucumis melo L. 'Shengkaihua' is a widely cultivated landraces in China. It has high sugar content, early maturity, and strong genetic growth potential. Cucumis melo L. 'Shengkaihua' provides a valuable gene pool for crop improvement of Cucumis crops. In this study, the complete chloroplast (cp) genome sequence of C. melo L. 'Shengkaihua' was determined using next-generation sequencing. The entire cp genome was determined to be 156,017 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 86,335 and 18,088 bp, respectively, which were separated by a pair of 25,797 bp inverted repeat (IR) regions. The genome contained 133 genes, including 88 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of the genome is 36.9%. A phylogenetic tree reconstructed by 24 chloroplast genomes reveals that C. melo L. 'Shengkaihua' is most related to Cucumis melo var. inodorus.
- 相关文献
作者其他论文 更多>>
-
Rapid Mining of Candidate Genes for the Branchless Phenotype in Watermelon by Bulked Segregant Analysis Using Whole-genome Resequencing
作者：Ren, Kaili;Su, Yongquan;Tang, Taoxia;Kong, Weiping;Yang, Yonggang;Zhao, Xiaoqin;Cheng, Hong
关键词：BSA-seq; Citrullus lanatus; gene mapping; gene annotation; lateral branch
-
Response of soil microbial community diversity to continuous cucumber cropping in facilities along the Yellow River irrigation area
作者：Huang, Shuchao;Yu, Jihua;Lyu, Jian;Jin, Li;Jin, Ning;Hou, Dong;Yue, Hongzhong;Zhang, Dongqin;Li, Yali
关键词：
-
Identification of CmACL genes in melon and analysis of their potential functions in fruit sugar and acid accumulation
作者：Ren, Kaili;Kong, Weiping;Tang, Taoxia;Cheng, Hong
关键词：melon; ACL gene family; ATP-citrate lyase; citric acid; fruit
-
Enhancing heat stress tolerance in Lanzhou lily (Lilium davidii var. unicolor) with Trichokonins isolated from Trichoderma longibrachiatum SMF2
作者：Cao, Xing;Li, Haiyan;Yue, Wenxiu;Liu, Tao;Sui, Juanjuan;Hou, Dong;Liang, Jiahui;Wu, Ze
关键词：Lanzhou lily; Trichokonins; thermotolerance; physiological response; RNA-Seq; Hsf
-
Identification of Key Gene Networks Controlling Soluble Sugar and Organic Acid Metabolism During Oriental Melon Fruit Development by Integrated Analysis of Metabolic and Transcriptomic Analyses
作者：Cheng, Hong;Kong, Weiping;Tang, Taoxia;Ren, Kaili;Zhang, Kaili;Wei, Huxia;Lin, Tao
关键词：oriental melon; metabolome; transcriptome; fruit; soluble sugar; organic acid
-
Exploring the Agrobacterium-mediated transformation with CRISPR/Cas9 in cucumber (Cucumis sativus L.)
作者：Zhao, Ziyao;Qi, Yaguang;Yang, Zhimin;Cheng, Liyu;Sharif, Rahat;Li, Yuhong;Zhao, Ziyao;Sharif, Rahat;Raza, Ali;Chen, Peng;Hou, Dong
关键词：Cucumber; GUS assay; Genetic transformation; CRISPR; Cas9
-
The complete chloroplast genome of Cucumis anguria var. anguria (Cucurbitaceae) and its phylogenetic implication
作者：Cheng, Hong;Kong, Wei-ping;Hou, Dong;Cheng, Hong;Zhang, Min-min
关键词：Cucumis anguria var; anguria; complete chloroplast genome; phylogenetic analysis; Cucurbitaceae
