Development of SSR Markers for Coconut (Cocos nucifera L.) by Selectively Amplified Microsatellite (SAM) and Its Applications
文献类型: 外文期刊
作者: Wu, Yi 1 ; Yang, Yaodong 1 ; Qadri, Rashad 1 ; Iqbal, Amjad 1 ; Li, Jing 1 ; Fan, Haikuo 1 ; Wu, Yaoting 2 ;
作者机构: 1.Chinese Acad Trop Agr Sci, Hainan Key Lab Trop Oil Crops Biol, Coconuts Res Inst, 496 Wenqing Av, Wenchang 571339, Hainan, Peoples R China
2.Hainan Univ, Haikou 570228, Hainan, Peoples R China
关键词: Coconut; Selectively amplified microsatellite (SAM); SSR markers; Transferability; Palm trees
期刊名称:TROPICAL PLANT BIOLOGY ( 影响因子:1.512; 五年影响因子:2.011 )
ISSN: 1935-9756
年卷期: 2019 年 12 卷 1 期
页码:
收录情况: SCI
摘要: Coconut is an important tropical fruit and oil crop. Its long generation time, low multiplication rate and recalcitrant seeds make coconut more difficult for breeding and selection. New technologies and extensive resources to evaluate coconut breeding strategies are the demand of today. Molecular markers had the potential to dramatically increase the efficiency and efficacy in the areas of germplasm management, genotype identification and marker-assisted selection of economically important traits of coconut. However, the lack of relevant molecular techniques impedes the development of a new strategy for the genetic improvement of the coconut. In this study, we have successfully developed 84 SSR markers by Selectively Amplified Microsatellite from coconut genome and more than 90% of these SSR showed good transferability to the palm family. The study will enrich the genomic-SSR pool for coconut and also for the other palm tree. Besides, it will provide the scientists with more options for coconut germplasm evaluation, constructing a coconut genetic linkage map and designing the breeding programs for producing superior cultivars of coconut.
- 相关文献
作者其他论文 更多>>
-
Research Progress on Gene Regulation of Plant Floral Organogenesis
作者:Zhou, Lixia;Yang, Yaodong;Zhou, Lixia;Iqbal, Amjad;Yang, Yaodong;Iqbal, Amjad;Yang, Mengdi
关键词:floral organ; gene regulation; MADS box; AP2/ERF; NAP
-
Interaction of R2R3-MYB transcription factor EgMYB111 with ABA receptors enhances cold tolerance in oil palm
作者:Zhou, Lixia;Li, Rui;Yang, Xuanwen;Yang, Yaodong;Zhou, Yongfeng;Zhou, Lixia;Li, Rui;Yang, Yaodong;Iqbal, Amjad;Yang, Xuanwen;Peng, Yanling;Wang, Yiwen;Xu, Qi;Su, Xiangnian;Zhou, Yongfeng;Wang, Yiwen;Iqbal, Amjad
关键词:Elaeis guineensis; Oil palm; MYB transcription factors; EgMYB111; ABA signaling pathway; Cold tolerance
-
Assessment of bisulfite sequencing alignment tools for whole genome analysis in plants
作者:Wu, Qiufei;Yang, Yaodong;Zhou, Lixia;Wu, Qiufei;Yang, Yaodong;Iqbal, Amjad;Zhou, Lixia;Yang, Mengdi;Iqbal, Amjad
关键词:DNA methylation; Whole genome bisulfite sequencing; Sequence alignment; Plant
-
Genome-wide characterization of the NRT1 family members under cold stress in Coconut (Cocos nucifera L.)
作者:Liu, Xiaomei;Li, Jing;Luo, Dan;Ding, Hao;Zhang, Mengluo;Gao, Ping;Mehvish, Ambreen;Sun, Xiwei;Tong, Chaoqun;Wu, Qiufei;Yang, Yaodong;Iqbal, Amjad;Liu, Xiaomei;Li, Jing;Luo, Dan;Ding, Hao;Zhang, Mengluo;Gao, Ping;Mehvish, Ambreen;Sun, Xiwei;Tong, Chaoqun;Wu, Qiufei;Yang, Yaodong
关键词:Nitrate transporters; Coconut; Gene structure; Nitrogen; Cold stress
-
Sensory analysis combined with targeted metabolomics reveal quality changes in solid and liquid endosperm of postharvest tender coconut
作者:Shen, Xiaojun;Li, Jing;Sun, Xiwei;Li, Jia;Li, Dongxia;Yang, Yaodong;Shen, Xiaojun;Li, Jing;Sun, Xiwei;Yang, Yaodong
关键词:Coconut water; Coconut flesh/meat; Sugars; Organic acids; Amino acids; Fatty acids
-
Identification of key genes and signaling pathways in coconut (Cocos nucifera L.) under drought stress via comparative transcriptome analysis
作者:Akter, Md. Babul;Li, Jing;Lv, Xiang;Mehvish, Ambreen;Abu Sayed, Md.;Yang, Yaodong;Akter, Md. Babul;Li, Jing;Lv, Xiang;Saand, Mumtaz Ali;Mehvish, Ambreen;Abu Sayed, Md.;Yang, Yaodong;Saand, Mumtaz Ali
关键词:Drought stress; Antioxidant enzymes; Transcriptome; Plant hormone signal transduction; MAPK signaling pathway; Differentially expressed genes (DEGs) and coconut
-
Genome-wide association analysis reveals regulatory genes for the metabolite synthesis of 2-acetyl-1-pyrroline in aromatic coconut (Cocos nucifera L.)
作者:Ding, Hao;Lv, Xiang;Liu, Xiaomei;Sun, Xiwei;Li, Jing;Yang, Yaodong;Ding, Hao;Lv, Xiang;Zhou, Guangzhen;Liu, Xiaomei;Sun, Xiwei;Li, Jing;Yang, Yaodong;Zhou, Guangzhen;Iqbal, Amjad
关键词:Aromatic coconut; 2AP; SNP; Genome-wide association study (GWAS); Haplotype analysis



