Comparative transcriptome analysis reveals the candidate genes involved in SDR unreduced female gamete formation in the diploid rubber tree (Hevea brasiliensis (Willd. ex A. Juss.) Mull. Arg.)
文献类型： 外文期刊
作者： Zhang, Yuanyuan 1 ; Huang, Xiao 1 ; Li, Weiguo 1 ;
作者机构： 1.Chinese Acad Trop Agr Sci, Rubber Res Inst, Haikou 571101, Hainan, Peoples R China
2.State Ctr Rubber Breeding, Haikou 571101, Hainan, Peoples R China
3.Minist Agr & Rural Affairs, Key Lab Biol & Genet Resources Rubber Tree, Haikou 571101, Hainan, Peoples R China
4.State Key Lab Incubat Base Cultivat & Physiol Tro, Haikou 571101, Hainan, Peoples R China
关键词： Hevea brasiliensis; Unreduced gametes; Second division restitution; RNA-seq
期刊名称：JOURNAL OF RUBBER RESEARCH （ 影响因子：0.667； 五年影响因子：0.618 ）
ISSN： 1511-1768
年卷期： 2021 年 24 卷 3 期
页码：
收录情况： SCI
摘要： Studying the genetic mechanism of 2n gametogenesis is of great significance for understanding and utilizing 2n gametes. We previously found that the rubber clone GT1 could spontaneously and steadily produce second division restitution (SDR) 2n female gametes, indicating that the occurrence of 2n female gametes resulted from gene mutation. Furthermore, low temperature during flower development increased the frequency of 2n female gametes. To identify the genes and reveal the molecular mechanism of SDR-type unreduced female gamete formation in diploid rubber tree, six genes related to SDR 2n gametogenesis were identified by comparing the transcriptomes of female flowers with a high frequency of 2n gametes and female flowers with a low frequency of 2n gametes. A total of 1709 differentially expressed genes were detected in female flowers under cold conditions, with 872 and 837 genes up-regulated and down-regulated, respectively. Six genes, including APC/C, NACK1, NACK2, NPK1, ANP1, and RBR, which are known to be related to SDR-type 2n gametogenesis, were identified and verified by quantitative real-time PCR. Gene function annotation indicated six genes involved in three cytological mechanisms and four corresponding genetic mechanisms of SDR-type 2n gametogenesis. These results suggest that the 2n female gametogenesis process of the rubber tree clone GT1 involves multiple molecular genetic mechanisms, which may differ from model plants such as Arabidopsis and tobacco. Our study provides a basis for identifying the functional genes of natural 2n female gametogenesis, as well as a molecular perspective for revealing the genetic mechanism of the spontaneous production of unreduced female gametes in rubber trees.
- 相关文献
作者其他论文 更多>>
-
ScWRKY2: a key regulator for smut resistance in sugarcane
作者：Wang, Dongjiao;Wang, Wenzhi;Lin, Peixia;Sun, Tingting;Zhao, Wanying;Zhang, Yuanyuan;Wu, Qibin;Que, Youxiong;Gou, Yaxin;Yi, Chao;Li, Zhenxiang;Wang, Wei;Wang, Ting;Su, Yachun;Wu, Qibin;Que, Youxiong
关键词：sugarcane; smut disease; WRKY; disease resistance function; molecular mechanism
-
A high-precision segmentation method for rubber tree stone cells
作者：Pan, Meixi;Zhou, Guoxiong;Yu, Yunlong;Yang, Jin;Zhao, Tianrui;Liu, Genhua;Zhang, Yuanyuan
关键词：Rubber tree stone cells; low-rank KAN module; wave-SC module; CGWO optimization algorithm
-
LncRNAs co-expressed with targeted genes to regulate sugarcane response to Sporisorium scitamineum infection
作者：Zhao, Wanying;Zhao, Zhennan;Wang, Dongjiao;Zhang, Yuanyuan;Lin, Peixia;Zhang, Zihao;Que, Youxiong;Wu, Qibin;Zhao, Zhennan;Que, Youxiong;Wu, Qibin
关键词：Sugarcane;
Sporisorium scitamineum ; RNA-seq; LncRNAs; Regulatory network -
Genome-wide identification of rubber tree PILS auxin transporter gene families and functional characterization of HbPILS6
作者：Yang, Baoyi;Li, Weifang;Huang, Xiao;Zhang, Yuanyuan;Gao, Xinsheng;Ding, Shitao;Wang, Yao;Wang, Xiangjun;Yang, Baoyi;Qi, Juncang
关键词：
Hevea brasiliensis ;PIN-LIKES (PILS) gene family;HbPILS6 ; Plant height regulation; Auxin signaling; Stress response -
Tetraploidization Altered Phenotypic Traits and Metabolite Profile of Java Ginseng (Talinum paniculatum (Jacq.) Gaertn.)
作者：Liu, Yingying;Huang, Xiao;Gao, Xinsheng;Zhang, Xiaofei;Huang, Huasun;Li, Weiguo;Zhang, Yuanyuan
关键词：tetraploidization; phenotypical changes; biomass; metabolites
-
A Bottom-Up Multi-Feature Fusion Algorithm for Individual Tree Segmentation in Dense Rubber Tree Plantations Using Unmanned Aerial Vehicle-Light Detecting and Ranging
作者：Zeng, Zhipeng;Huang, Xiao;Wang, Xiangjun;Zeng, Zhipeng;Miao, Junpeng;Chen, Peng;Tan, Junxiang;Zeng, Zhipeng;Zhou, Ping
关键词：individual tree segmentation; LiDAR point clouds; rubber plantations; bottom-up segmentation; multi-feature fusion; precision forestry
-
Phenotypic and transcriptomic analysis reveals key genes associated with plant height in rubber tree and functional characterization of the candidate gene HbFLA11
作者：Yang, Baoyi;Zhang, Yuanyuan;Li, Weiguo;Huang, Xiao;Gao, Xinsheng;Wang, Xiangjun;Yang, Baoyi;Qi, Juncang;Yang, Baoyi
关键词：
