Characterization of the complete chloroplast genome of Hevea pauciflora (Euphorbiaceae), an important wild relative of the rubber tree
文献类型： 外文期刊
作者： Hu, Yan-Shi 1 ; Huang, Hua-Sun 1 ; Liu, Jin 2 ;
作者机构： 1.Chinese Acad Trop Agr Sci, Rubber Res Inst, Danzhou, Peoples R China
2.Yunnan Inst Trop Crops, Xishuangbanna, Peoples R China
关键词： Hevea pauciflora; chloroplast genome; characterization; phylogenetic analysis
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.61； 五年影响因子：0.628 ）
ISSN：
年卷期： 2022 年 7 卷 9 期
页码：
收录情况： SCI
摘要： Hevea pauciflora belongs to the Euphorbiaceae family, an important wild relative of the rubber tree. This study sequenced, assembled, and annotated the complete chloroplast genome of H. pauciflora. The complete chloroplast genome is 161,123 bp with a canonical quadripartite structure containing a large single-copy (LSC) region (89,109 bp), a small single-copy (SSC) region (18,376 bp), and two inverted repeat regions (IRa and IRb) (26,819 bp, each). A total of 134 genes were annotated, including 86 protein-coding genes, four pseudogenes, 36 tRNA genes, and eight rRNA genes. The 134 genes include four major groups: 'self-replication', 'photosynthesis', 'unknown function', and 'others'. A phylogenetic analysis clustered H. pauciflora, H. brasiliensis, H. camargoana, and H. benthamiana into one clade, consistent with traditional taxonomy. This study provides useful data for further studies of Hevea genus and the phylogenetic relationships of Euphorbiaceae species.
- 相关文献
作者其他论文 更多>>
-
Heterozygosity analysis of spontaneous 2n female gametes and centromere mapping of the diploid Hevea brasiliensis based on full-sib triploid populations
作者：Zhang, Yuan-yuan;Huang, Xiao;Zhang, Xiao-fei;Gao, Xin-sheng;Wang, Xiang-jun;Wei, Ming-ming;Huang, Hua-sun;Li, Weiguo;Li, Hong-kun;Yuan, Yu-jiao
关键词：2n female gamete; SDR; Centromere location; Full-sib population; Hevea brasiliensis
-
Effect of new type extrusion modification technology on supramolecular structure and in vitro glycemic release characteristics of starches with various estimated glycemic indices
作者：Li, Bo;Luo, Wanru;Huang, Chongxing;Li, Bo;Zhang, Yanjun;Li, Bo;Zhang, Yanjun;Liu, Jin
关键词：glycemic release rate; improved extrusion cooking technology; staple crop starch; fine supramolecular structure; principal component analysis
-
A study of starch resources with high-amylose content from five Chinese mutant banana species
作者：Li, Bo;Chen, Xiaoai;Zhang, Yanjun;Tan, Lehe;Zhu, Kexue;Li, Bo;Huang, Chongxing;Li, Bo;Chen, Xiaoai;Zhang, Yanjun;Tan, Lehe;Zhu, Kexue;Xie, Baoguo;Liu, Jin;Wang, Yitong;Zhu, Libin
关键词：high amylose banana starch; new Chinese banana resources; A-or B-type crystallize; physicochemical properties; particle morphology properties; statistical analysis
-
The complete chloroplast genome of Hevea camargoana
作者：Niu, Ying-Feng;Zheng, Cheng;Liu, Zi-Yan;Hu, Yan-Shi;Liu, Jin
关键词：Hevea camargoana; chloroplast genome; phylogenetic
-
Complete chloroplast genome of Hevea benthamiana, a SALB-resistant relative wild species of rubber tree
作者：Niu, Ying-Feng;Liu, Zi-Yan;Zheng, Cheng;Hu, Yan-Shi;Liu, Jin
关键词：Hevea benthamiana; chloroplast; genome sequencing
-
Relationship between rate of laticifer differentiation, number of laticifer rows and rubber yield among 1981 IRRDB germplasm collections of Hevea brasiliensis
作者：Yu, Jun-Hong;Zeng, Xia;Yang, Shu-Guang;Huang, Hua-Sun;Tian, Wei-Min
关键词：conventional breeding;early selection;Hevea brasiliensis Muell.Arg.;laticifer differentiation;mechanical wounding;1981 IRRDB germplasm collections
