文献类型： 外文期刊
作者： Liu, Ying 1 ; Chen, Xi 2 ; Yin, Yanqiong 1 ; Li, Xiaowei 5 ; He, Kang 2 ; Zhao, Xueqing 1 ; Li, Xiangyong 1 ; Luo, Xiyan 1 ; Mei, Yang 2 ; Wang, Zuoqi 2 ; Shu, Runguo 2 ; Cheng, Ziqi 2 ; Gebretsadik, Kifle Gebreegziabiher 1 ; Luo, Chen 7 ; Wang, Ran 7 ; Lv, Yaobin 5 ; Chen, Aidong 1 ; Li, Fei 2 ;
作者机构： 1.Agr Environm & Resources Inst, Yunnan Acad Agr Sci, Key Lab Green Prevent & Control Agr Transboundary, Kunming 650205, Peoples R China
2.Zhejiang Univ, Inst Insect Sci, State Key Lab Rice Biol, Hangzhou 310058, Peoples R China
3.Zhejiang Univ, Inst Insect Sci, Key Lab Mol Biol crop Pathogens & insects, Minist Agr & Rural Affairs, Hangzhou 310058, Peoples R China
4.Zhejiang Univ, Inst Insect Sci, Key Lab Biol crop Pathogens & Insects Zhejiang Pro, Hangzhou 310058, Peoples R China
5.Inst Plant Protect & Microbiol, Zhejiang Acad Agr Sci, Hangzhou 310021, Peoples R China
6.Tigray Agr Res Inst TARI, Tigray, Mekele, Ethiopia
7.Beijing Acad Agr & Forestry Sci, Inst Plant Protect, Beijing 100097, Peoples R China
期刊名称：SCIENTIFIC DATA （ 2022影响因子：9.8； 五年影响因子：10.8 ）
年卷期： 2023 年 10 卷 1 期
收录情况： SCI
摘要： The tomato pinworm, Tuta absoluta, or Phthorimaea absouta, is native to South America, but quickly spread to other regions of world, including Europe, Africa, and Asia, devastating to global tomato production. However, a lack of high-quality genome resources makes it difficult to understand its high invasiveness and ecological adaptation. Here, we sequenced the genome of the tomato pinworm using Nanopore platforms, yielding a genome assembly of 564.5 Mb with contig N50 of 3.33 Mb. BUSCO analysis demonstrated that this genome assembly has a high-level completeness of 98.0% gene coverage. In total, 310 Mb are repeating sequences accounting for 54.8% of genome assembly, and 21,979 protein-coding genes are annotated. Next, we used the Hi-C technique to anchor 295 contigs to 29 chromosomes, yielding a chromosome-level genome assembly with a scaffold N50 of 20.7 Mb. In sum, the high-quality genome assembly of the tomato pinworm is a useful gene resource that contributes to a better understanding of the biological characteristics of its invasiveness and will help in developing an efficient control policy.
- 相关文献
作者其他论文 更多>>
-
Circabidian rhythm of sex pheromone reception in a scarab beetle
作者：Wang, Yinliang;Dong, Huanhuan;Qu, Yafei;Qin, Jianhui;Li, Kebin;Cao, Yazhong;Zhang, Shuai;Yin, Jiao;Wang, Yinliang;Dong, Huanhuan;Zhou, Yuxin;Ren, Bingzhong;Luo, Chen;Leal, Walter S.
关键词：
-
Auxin regulates bulbil initiation by mediating sucrose metabolism in Lilium lancifolium
作者：Xin, Yin;Chen, Xi;Liang, Jiahui;Wu, Jingxiang;Zhang, Mingfang;Zhang, Xiuhai;Du, Yunpeng;Xin, Yin;Wang, Shaokun;Pan, Wenqiang;Wu, Jingxiang;Wu, Jian;Chen, Xi;Yu, Xiaonan;Zaccai, Michele
关键词：
-
Tetraniliprole risk assessment: Unveiling a hidden threat for managing a generalist herbivore
作者：Qu, Cheng;Li, Yunyi;Zhan, Qianyuan;Luo, Chen;Wang, Ran;Qu, Cheng;Wang, Ran;Wang, Jinda;Guedes, Raul Narciso C.
关键词：Tobacco cutworm; Realized heritability; Baseline of susceptibility; Mode of inheritance; Biochemical mechanism; Transgenerational hormesis
-
Risk assessment, cross-resistance, biochemical mechanism and fitness cost of tetraniliprole resistance in the tomato pinworm Tuta absoluta
作者：Qu, Cheng;Yao, Jiaqi;Zhan, Qianyuan;Zhang, Daofeng;Li, Yunyi;Wang, Ran;Qu, Cheng;Yao, Jiaqi;Zhan, Qianyuan;Zhang, Daofeng;Li, Yunyi;Wang, Ran;Yao, Jiaqi;Huang, Jianlei
关键词：Tuta absoluta; Tetraniliprole; Risk assessment; Cross -resistance; Biochemical mechanism; Fitness cost
-
Baseline of susceptibility, risk assessment, biochemical mechanism, and fitness cost of resistance to dimpropyridaz, a novel pyridazine pyrazolecarboxamide insecticide, in Bemisia tabaci from China
作者：Tang, Juan;Qu, Cheng;Zhan, Qianyuan;Zhang, Daofeng;Luo, Chen;Wang, Ran;Tang, Juan;Qu, Cheng;Zhan, Qianyuan;Zhang, Daofeng;Luo, Chen;Wang, Ran;Wang, Jinda
关键词：Bemisia tabaci; Dimpropyridaz; Baseline of susceptibility; Risk assessment; Fitness cost; Detoxifying enzymes
-
Orco mediates olfactory behavior and oviposition in the whitefly Bemisia tabaci
作者：Li, Fengqi;Luo, Chen;Li, Fengqi;Tian, Jiahui;Di, Zhongjuan;Qu, Cheng;Luo, Chen;Fu, Yuejun;Yang, Shiyong
关键词：Whitefly; Orco; Behavior; Host recognition; Oviposition; RNAi
-
Overexpression of CYP6CX4 contributing to field-evolved resistance to flupyradifurone, one novel butenolide insecticide, in Bemisia tabaci from China
作者：Zhang, Qinghe;Tang, Juan;Gao, Bingli;Qu, Cheng;Luo, Chen;Wang, Ran;Tang, Juan;Wang, Jinda
关键词：Bemisia tabaci; Flupyradifurone; Cytochrome P450
