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Single nucleotide polymorphism tightly linked to a major QTL on chromosome 7A for both kernel length and kernel weight in wheat

文献类型： 外文期刊

作者： Su, Zhenqi 1 ; Jin, Sujuan 2 ; Lu, Yue 2 ; Zhang, Guorong 2 ; Chao, Shiaoman 4 ; Bai, Guihua 2 ;

作者机构： 1.Hebei Acad Agr & Forestry Sci, Inst Cereal & Oil Crops, Shijiazhuang 050035, Peoples R China

2.Kansas State Univ, Dept Agron, Manhattan, KS 66506 USA

3.Shijiazhuang Acad Agr & Forestry Sci, Shijiazhuang 050041, Peoples R China

4.USDA Cereal Crops Res Unit, Fargo, ND 58102 USA

5.USDA Hard Winter Wheat Genet Res Unit, Manhattan, KS 66506 USA

关键词： Triticum aestivum;92K SNP array;TaTKW-7AL;KASPar markers;Pleiotropic effect on yield traits

期刊名称：MOLECULAR BREEDING （ 影响因子：2.589； 五年影响因子：2.75 ）

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收录情况： SCI

摘要： Thousand-kernel weight (TKW) is one of the major components of grain yield in wheat (Triticum aestivum). Identifying major quantitative trait loci (QTLs) for TKW and developing effective markers are prerequisite for success in marker-assisted selection (MAS) to improve wheat yield through breeding. This study mapped a major QTL, designated as TaTKW-7AL, for increasing TKW on the long arm of chromosome 7A of 'Clark' to a 1.3-cM interval between single nucleotide polymorphism (SNP) markers IWB13913 and IWA5913. This QTL explained 19.7 % of the phenotypic variation for TKW. A QTL for increasing kernel length (KL), one of the major components of TKW, was mapped in the same interval as TaTKW-7AL, suggesting that increased TKW by the QTL in 'Clark' is most likely due to the increased KL. Association analysis on a diversity panel of 200 US winter wheat accessions also identified a haplotype of three SNP markers (IWB13913, IWB6693 and IWA5913) that were tightly associated with the both KL and TKW. The analysis of allele frequencies of the haplotype in the diversity panel suggested that the favorable allele of TaTKW-7AL has not been strongly selected for in practice and has potential to be used to improve grain yield in US hard winter wheat breeding. Two user-friendly flanking KASParmarkers, IWB13913 and IWA5913, were developed for MAS of TaTKW-7AL.

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