Genome-Wide Analysis of MYB Gene Family in Chrysanthemum xmorifolium Provides Insights into Flower Color Regulation
文献类型: 外文期刊
作者: Wang, Bohao 1 ; Wen, Xiaohui 2 ; Fu, Boxiao 1 ; Wei, Yuanyuan 1 ; Song, Xiang 1 ; Li, Shuangda 1 ; Wang, Luyao 1 ; Wu, Yanbin 1 ; Hong, Yan 1 ; Dai, Silan 1 ;
作者机构: 1.Beijing Forestry Univ, Beijing Key Lab Ornamental Plants Germplasm Innova, Key Lab Genet & Breeding Forest Trees & Ornamental, Beijing Lab Urban & Rural Ecol Environm,Natl Engn, Beijing 100083, Peoples R China
2.Zhejiang Acad Agr Sci, Zhejiang Inst Landscape Plants & Flowers, Hangzhou 311251, Peoples R China
关键词: chrysanthemum; MYB gene family; duplicates; selection pressure; anthocyanin biosynthesis; gene expression pattern
期刊名称:PLANTS-BASEL ( 影响因子:4.5; 五年影响因子:4.8 )
ISSN: 2223-7747
年卷期: 2024 年 13 卷 9 期
页码:
收录情况: SCI
摘要: MYBs constitute the second largest transcription factor (TF) superfamily in flowering plants with substantial structural and functional diversity, which have been brought into focus because they affect flower colors by regulating anthocyanin biosynthesis. Up to now, the genomic data of several Chrysanthemum species have been released, which provides us with abundant genomic resources for revealing the evolution of the MYB gene family in Chrysanthemum species. In the present study, comparative analyses of the MYB gene family in six representative species, including C. lavandulifolium, C. seticuspe, C. xmorifolium, Helianthus annuus, Lactuca sativa, and Arabidopsis thaliana, were performed. A total of 1104 MYBs, which were classified into four subfamilies and 35 lineages, were identified in the three Chrysanthemum species (C. lavandulifolium, C. seticuspe, and C. xmorifolium). We found that whole-genome duplication and tandem duplication are the main duplication mechanisms that drove the occurrence of duplicates in CmMYBs (particularly in the R2R3-MYB subfamily) during the evolution of the cultivated chrysanthemums. Sequence structure and selective pressure analyses of the MYB gene family revealed that some of R2R3-MYBs were subjected to positive selection, which are mostly located on the distal telomere segments of the chromosomes and contain motifs 7 and 8. In addition, the gene expression analysis of CmMYBs in different organs and at various capitulum developmental stages of C. xmorifolium indicated that CmMYBS2, CmMYB96, and CmMYB109 might be the negative regulators for anthocyanin biosynthesis. Our results provide the phylogenetic context for research on the genetic and functional evolution of the MYB gene family in Chrysanthemum species and deepen our understanding of the regulatory mechanism of MYB TFs on the flower color of C. xmorifolium.
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