The chromosome-level genome assembly and annotation of an invasive forest pest Obolodiplosis robiniae
文献类型： 外文期刊
作者： Huang, Lan 1 ; Wang, Li 1 ; Sun, Hui-Quan 1 ; Huai, Wen-Xia 1 ; Lin, Ruo-Zhu 1 ; Wei, Shu-Jun 2 ; Yao, Yan-Xia 1 ;
作者机构： 1.Chinese Acad Forestry, Ecol & Nat Conservat Inst, Key Lab Forest Protect Natl Forestry & Grassland A, Beijing 100091, Peoples R China
2.Beijing Acad Agr & Forestry Sci, Beijing 100097, Peoples R China
期刊名称：SCIENTIFIC DATA （ 影响因子：6.9； 五年影响因子：8.7 ）
ISSN：
年卷期： 2024 年 11 卷 1 期
页码：
收录情况： SCI
摘要： Biological invasion is a major global problem, leading to the loss of biodiversity and species extinction, and causing huge economic losses to countries. Obolodiplosis robiniae is a major invasive forest pest that has caused economic losses in Asia and Europe. Here, the chromosome- level genome of O. robiniae was assembled using the PacBio platform and Hi-C technology. A contig-level genome with a length of 199.49 Mb and a contig N50 of 4.66 Mb was assembled. Approximately 98.05% of contigs were successfully anchored to four chromosomes using Hi-C assisted genome assembly. The genome integrity was assessed to be 90.3% based on BUSCOs analysis. The high-quality genome provides valuable data for the study of invasive species, and a foundation for the understanding the biology and ecology of O. robiniae.
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