Characterization of the complete chloroplast genome of the endemic wild Chinese tree Castanea seguinii
文献类型: 外文期刊
作者: Cheng, Lili 1 ; Hu, Guanglong 2 ; Huang, Wugang 2 ; Cao, Qingchang 2 ; Lan, Yanping 2 ; Su, Shuchai 1 ;
作者机构: 1.Beijing Forestry Univ, Educ Minist, Key Lab Silviculture & Conservat, Beijing 100083, Peoples R China
2.Beijing Acad Forestry & Pomol Sci, Natl Chestnut Engn Technol Res Ctr, Beijing 100093, Peoples R China
关键词: Wild Castanea seguinii; chloroplast genome; Illumina sequencing; phylogenetic analysis
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.658; 五年影响因子:0.674 )
ISSN:
年卷期: 2019 年 4 卷 1 期
页码:
收录情况: SCI
摘要: The complete chloroplast genome sequence of an endemic wild Chinese tree Castanea seguinii was determined. The complete chloroplast genome is 160,862 bp and contains a pair of inverted repeat regions of 25,720 bp each, a large single-copy region of 90,440 bp, and a small single-copy region of 18,982 bp. The genome harbors 113 genes, including 79 protein-coding genes, four ribosomal RNA genes, and 30 transfer RNA genes. A phylogenetic analysis based on chloroplast genomes indicates that wild C. seguinii is closely related to wild Castanea mollissim.
- 相关文献
作者其他论文 更多>>
-
The MADS-box gene CmAP1 promotes flowering and petal development in Chinese chestnut (Castanea mollissima)
作者:Cheng, Yunhe;Cheng, Lili;Hu, Guanglong;Lan, Yanping;Cheng, Yunhe;Cheng, Lili;Hu, Guanglong;Lan, Yanping;Guo, Xiaomeng;Liu, Zhao;Guo, Xiaomeng;Liu, Zhao
关键词:
Castanea mollissima ;APETALA1 ; Gene expression; Flowering; Floral organ development -
Metabolome and Transcriptome Combined Reveal the Main Floral Volatile Compounds and Key Regulatory Genes of Castanea mollissima
作者:Guo, Xiaomeng;Cheng, Lili;Hu, Guanglong;Lan, Yanping;Cheng, Yunhe;Guo, Xiaomeng;Cheng, Lili;Hu, Guanglong;Lan, Yanping;Cheng, Yunhe;Guo, Xiaomeng;Liu, Zhao;Guo, Xiaomeng;Yang, Qianyu;Liu, Zhao
关键词:Castanea mollissima; flower; volatile organic compounds; GC-MS; transcriptome
-
Pan-genome analysis of three main Chinese chestnut varieties
作者:Hu, Guanglong;Cheng, Lili;Cheng, Yunhe;Mao, Weitao;Qiao, Yanjie;Lan, Yanping
关键词:Castanea mollissima; de novo assembly; pan-genome; waxy gene; Nanopore sequencing; genome database
-
Relationship of Soil Microbiota to Seed Kernel Metabolism in Camellia oleifera Under Mulched
作者:Ye, Honglian;Su, Shuchai;Ye, Honglian;Wen, Yue;Chen, Zhigang;Zhang, Taikui;Li, Shengxing;Guan, Menglong;Zhang, Yunqi
关键词:association analysis; Camellia oleifera; fruit development; metabolites changes; mulching; soil 16S rRNA
-
Haplotype Analysis of Chloroplast Genomes for Jujube Breeding
作者:Hu, Guanglong;Wu, Yang;Guo, Chaojun;Lu, Dongye;Dong, Ningguang;Chen, Bo;Qiao, Yanjie;Zhang, Yuping;Pan, Qinghua
关键词:Ziziphus jujuba; chloroplast genome; genomic structure; phylogenetic analysis; evolutionary relationship; breeding strategy
-
AfCHIL, a Type IV Chalcone Isomerase, Enhances the Biosynthesis of Naringenin in Metabolic Engineering
作者:Xu, Huanhuan;Xing, Jiayi;Li, Yi;Wang, Yongqin;Xu, Huanhuan;Li, Yi;Liu, Lecheng;Lan, Yanping;Xing, Jiayi
关键词:biosynthesis naringenin; chalcone synthase; chalcone isomerase; Allium fistulosum; flavonoid
-
New Insight into the Phylogeny and Taxonomy of Cultivated and Related Species of Crataegus in China, Based on Complete Chloroplast Genome Sequencing
作者:Hu, Guanglong;Wang, Yan;Zheng, Shuqi;Dong, Ningguang;Wang, Yiheng;Dong, Wenxuan
关键词:hawthorn; Crataegus; chloroplast genome; sequence divergence; interspecific relationships; phylogenetic analysis



