Stepwise Optimization of the RT-qPCR Protocol and the Evaluation of Housekeeping Genes in Pears (Pyrus bretschneideri) under Various Hormone Treatments and Stresses
文献类型: 外文期刊
作者: Zhou, Peng 1 ; Huang, Linlin 1 ; Wang, Yingtao 2 ; Li, Xiao 2 ; Feng, Xinxin 1 ; Li, Liulin 1 ;
作者机构: 1.Shanxi Agr Univ, Coll Hort, Taigu 030801, Peoples R China
2.Shijiazhuang Inst Fruit Trees, Hebei Acad Agr & Forestry, Shijiazhuang 050061, Peoples R China
关键词: housekeeping gene; RT-qPCR; hormone; biotic and abiotic stress; pear
期刊名称:HORTICULTURAE ( 影响因子:3.1; 五年影响因子:3.4 )
ISSN:
年卷期: 2023 年 9 卷 2 期
页码:
收录情况: SCI
摘要: Real-time quantitative PCR (RT-qPCR) has become a widely used method for exploring plant gene expression level. The method requires using some stably expressed genes as a reference to accurately normalize the RT-qPCR data. However, under various stresses and hormone treatments, the levels of most reference genes vary. Environmental variations also influence their expression levels. The lack of validated, stably expressed reference genes can mislead the study of gene function in pears. "Huangguan" pears have recently become the focus of research on stress resistance mechanisms, such as high resistance. Therefore, the aim of this study was to select the optimal reference genes in Huangguan pears, and we analyzed the expression of the genes EF1 alpha, ACT, SKD1, YLS8, UBQ, GAPDH, TUB, and WDP in a series of pear leaf sets under various stresses and hormone treatments. Using different statistical algorithms, we found that under various treatments, the WDP gene had more stable expression, ACT was the most stable under MeJA treatment, YLS8 was the most valuable reference gene under ABA hormone and heat stress conditions, and GAPDH showed worst results compared to other housekeeping genes, except under heat stress. These results will supply valuable and updated information for the selection of housekeeping genes in pears under biotic and abiotic stresses in the future.
- 相关文献
作者其他论文 更多>>
-
Transcriptome Profiling Reveals Potential Genes Involved in Salicylic Acid-Induced Arbutin Synthesis in Pear
作者:Li, Junhao;Li, Junhao;Ma, Yuchen;Cui, Tingting;Liu, Shaohua;Li, Liulin
关键词:pear; arbutin; salicylic acid; transcriptome; UGT
-
Reciprocal regulation of flower induction by ELF3 alpha and ELF3 beta generated via alternative promoter usage
作者:Wang, Peng;Li, Yu;Liu, Zhe;Li, Xuhan;Wang, Yicheng;Liu, Weijuan;Li, Xiao;Hu, Jianjian;Zhu, Wenyi;Li, Shan;Gu, Tingting;Xu, Dongqing;Tang, Chao;Li, Chao;Zhang, Shaoling;Wu, Juyou;Wang, Peng;Wang, Changquan;Gu, Tingting;Zhang, Shaoling;Wu, Juyou;Liu, Zhe;Li, Xiao;Wang, Yingtao;Wu, Juyou
关键词:
-
Responses of intracellular Ca2+ and its sensors to Venturia nashicola infection in pear (Pyrus bretschneideri) with differing resistance
作者:Liu, Yi;Li, Junhao;Li, Liulin;Wang, Yongbo
关键词:'Huangguan' pear; 'Xuehua' pear; Pear scab pathogen; Ca2+ signaling; Ca2+ sensor
-
Diversification and independent domestication of Asian and European pears
作者:Wu, Jun;Tao, Shutian;Gu, Chao;Yin, Hao;Qi, Kaijie;Wang, Runze;Li, Xiaolong;Wu, Juyou;Huang, Xiaosan;Zhang, Huping;Xie, Zhihua;Zhang, Mingyue;Li, Jiaming;Li, Leiting;Jin, Cong;Qin, Mengfan;Zhang, Jiaying;Wu, Xiao;Ke, Yaqi;Zhang, Shaoling;Wang, Yingtao;Li, Xiao;Xu, Jiabao;Tai, Shuaishuai;Li, Yanhong;Yue, Zhen;Wang, Jian;Yang, Huanmimg;Korban, Schuyler S.;Ming, Ray;Zheng, Danman;Fei, Zhangjun;Khan, Awais M.;Fei, Zhangjun;Ming, Ray;Postman, Joseph D.;Deng, Cecilia H.;Kumar, Satish;Chagne, David;Wang, Jian;Yang, Huanmimg
关键词:Pear (Pyrus); Re-sequencing genomes; Origin and evolution; Independent domestication; Fruit-related traits; Self-incompatibility