您好，欢迎访问北京市农林科学院 机构知识库！
北京市农林科学院机构知识库

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Multiple Lines of Evidence from Mitochondrial Genomes Resolve Phylogenetic Relationships of Parasitic Wasps in Braconidae

文献类型： 外文期刊

作者： Li, Qian 1 ; Wei, Shu-Jun 3 ; Tang, Pu 1 ; Wu, Qiong 1 ; Shi, Min 1 ; Sharkey, Michael J.; Chen, Xue-Xin 1 ;

作者机构： 1.Zhejiang Univ, Inst Insect Sci, State Key Lab Rice Biol, Hangzhou, Zhejiang, Peoples R China

2.Zhejiang Univ, Inst Insect Sci, Key Lab Agr Entomol, Minist Agr, Hangzhou, Zhejiang, Peoples R China

3.Beijing Acad Agr & Forestry Sci, Inst Plant

关键词： strand asymmetry;gene rearrangement;phylogeny;Hymenoptera;Braconidae

期刊名称：GENOME BIOLOGY AND EVOLUTION （ 影响因子：3.416； 五年影响因子：4.079 ）

ISSN： 1759-6653

年卷期： 2016 年 8 卷 9 期

页码：

收录情况： SCI

摘要： The rapid increase in the number of mitochondrial genomes in public databases provides opportunities for insect phylogenetic studies; but it also provides challenges because of gene rearrangements and variable substitution rates among both lineages and sites. Typically, phylogenetic studies use mitochondrial sequence data but exclude other features of the mitochondrial genome from analyses. Here, we undertook large-scale sequencing of mitochondrial genomes from a worldwide collection of specimens belonging to Braconidae, one of the largest families of Metazoa. The strand-asymmetry of base composition in the mitochondrial genomes of braconids is reversed, providing evidence for monophyly of the Braconidae. We have reconstructed a backbone phylogeny of the major lineages of Braconidae from gene order of the mitochondrial genomes. Standard phylogenetic analyses of DNA sequences provided strong support for both Cyclostomes and Noncyclostomes. Four subfamily complexes, that is, helconoid, euphoroid, sigalphoid, and microgastroid, within the Noncyclostomes were reconstructed robustly, the first three of which formed a monophyletic group sister to the last one. Aphidiinae was recovered as a lineage sister to other groups of Cyclostomes, while the Ichneutinae was recovered as paraphyletic. Separate analyses of the subdivided groups showed congruent relationships, employing different matrices and methods, for the internal nodes of the Cyclostomes and the microgastroid complex of subfamilies. This research, using multiple lines of evidence from mitochondria' genomes, illustrates multiple uses of mitochondrial genomes for phylogenetic inference in Braconidae.

  • 相关文献

[1]Two mitochondrial genomes from the families Bethylidae and Mutillidae: Independent rearrangement of protein-coding genes and higher-level phylogeny of the Hymenoptera. Wei, Shu-Jun,Li, Qian,Chen, Xue-Xin,Wei, Shu-Jun,Li, Qian,Chen, Xue-Xin,Wei, Shu-Jun,van Achterberg, Kees.

[2]The mitochondrial genome of the German wasp Vespula germanica (Fabricius, 1793) (Hymenoptera: Vespoidea: Vespidae). Zhou, Yuan,Xu, Zai-Fu,Hu, Yu-Lin,Wei, Shu-Jun,Hu, Yu-Lin.

[3]The mitochondrial genome of Tenthredo tienmushana (Takeuchi) and a related phylogenetic analysis of the sawflies (Insecta: Hymenoptera). Song, Sheng-Nan,Chen, Xue-Xin,Song, Sheng-Nan,Chen, Xue-Xin,Song, Sheng-Nan,Wang, Ze-Hua,Wei, Shu-Jun,Li, Yue.

[4]The mitochondrial genome of Polistes jokahamae and a phylogenetic analysis of the Vespoidea (Insecta: Hymenoptera). Song, Sheng-Nan,Chen, Xue-Xin,Song, Sheng-Nan,Chen, Xue-Xin,Chen, Peng-Yan,Wei, Shu-Jun.

[5]Next-Generation Sequencing of Two Mitochondrial Genomes from Family Pompilidae (Hymenoptera: Vespoidea) Reveal Novel Patterns of Gene Arrangement. Chen, Peng-Yan,Zheng, Bo-Ying,Wei, Shu-Jun,Chen, Peng-Yan,Liu, Jing-Xian. 2016

[6]The complete mitochondrial genome of the beet armyworm Spodoptera exigua (Hubner) (Lepodiptera: Noctuidae). Wu, Qiu-Ling,Gong, Ya-Jun,Wei, Shu-Jun,Wu, Qiu-Ling,Gu, Yun. 2013

[7]Rearrangement of the nad1 gene in Pristaulacus compressus (Spinola) (Hymenoptera: Evanioidea: Aulacidae) mitochondrial genome. Wei, Shu-Jun,Wu, Qiu-Ling,Wei, Shu-Jun,Chen, Xue-Xin,Wu, Qiu-Ling,van Achterberg, Kees. 2015

[8]Complete mitogenome of the Argyrogramma agnata (Lepidoptera: Noctuidae). Gong, Ya-Jun,Wu, Qiu-Ling,Wei, Shu-Jun,Wu, Qiu-Ling.

[9]The complete mitochondrial genome of the codling moth Cydia pomonella (Lepidoptera: Tortricidae). Shi, Bao-Cai,Liu, Wei,Wei, Shu-Jun,Liu, Wei.

[10]The complete mitochondrial genome of the oriental fruit moth Grapholita molesta (Busck) (Lepidoptera: Tortricidae). Gong, Ya-jun,Shi, Bao-cai,Kang, Zong-jiang,Zhang, Fan,Wei, Shu-jun.

[11]The mitochondrial genome of the Vespa bicolor Fabricius (Hymenoptera: Vespidae: Vespinae). Wei, Shu-Jun,Niu, Fang-Fang,Niu, Fang-Fang,Tan, Jiang-Li.

[12]The complete mitochondrial genome of the summer fruit tortrix moth Adoxophyes orana (Lepidoptera: Tortricidae). Wu, Qiu-Ling,Liu, Wei,Shi, Bao-Cai,Wei, Shu-Jun,Wu, Qiu-Ling,Liu, Wei,Gu, Yun.

[13]The complete mitogenome of the turnip moth Agrotis segetum (Lepidoptera: Noctuidae). Wu, Qiu-Ling,Gu, Yun,Wu, Qiu-Ling,Cui, Wen-Xia,Du, Bao-Zhen,Wei, Shu-Jun,Du, Bao-Zhen.

[14]The complete mitochondrial genome of Taeniogonalos taihorina (Bischoff) (Hymenoptera: Trigonalyidae) reveals a novel gene rearrangement pattern in the Hymenoptera. Wu, Qiu-Ling,Shi, Bao-Cai,Wei, Shu-Jun,Wu, Qiu-Ling,Gu, Yun,Li, Qian,Chen, Xue-Xin,van Achterberg, Cees.

[15]Rearrangement of trnQ-trnM in the mitochondrial genome of Allantus luctifer (Smith) (Hymenoptera: Tenthredinidae). Wei, Shu-Jun,Niu, Fang-Fang,Du, Bao-Zhen,Niu, Fang-Fang,Du, Bao-Zhen.

[16]The first complete mitogenome for the superfamily Cossoidea of Lepidoptera: The seabuckthorn carpenter moth Eogystia hippophaecolus. Gong, Ya-Jun,Wu, Qiu-Ling,Wei, Shu-Jun,Wu, Qiu-Ling.

[17]Fungal Biodiversity Profiles 21-30. Buyck, Bart,Duhem, Bernard,Hofstetter, Valerie,Das, Kanad,Parihar, Arvind,Jayawardena, Ruvishika S.,Niveiro, Nicolas,Michlig, Andrea,Fabian Popoff, Orlando,Andrea Ramirez, Natalia,Niveiro, Nicolas,Michlig, Andrea,Fabian Popoff, Orlando,Andrea Ramirez, Natalia,Lewish, David P.,Pereira, Olinto L.,da Silva, Meiriele,Prasher, Indu B.,Verma, Rajnish K.,Adhikari, Sinchan,Omar Alberto, Edgardo,Bulgakov, Timur S.,Castareda-Ruiz, Rafael F.,Hembrom, Manoj E.,Hyde, Kevin D.,Hyde, Kevin D.,Buyck, Bart,Nuytinck, Jorinde.

[18]More than just a coating: Ecological importance, taxonomic occurrence and phylogenetic relationships of seed coat mucilage. Yang, Xuejun,Huang, Zhenying,Yang, Xuejun,Baskin, Jerry M.,Baskin, Carol C.,Baskin, Carol C.. 2012

[19]Halodiatrype, a novel diatrypaceous genus from mangroves with H. salinicola and H-avicenniae spp. nov.. Dayarathne, M. C.,To-anun, C.,Jones, E. B. G.,Dayarathne, M. C.,Phookamsak, R.,Hyde, K. D.,Manawasinghe, I. S.,Dayarathne, M. C.,Phookamsak, R.,Hyde, K. D.,Dayarathne, M. C.,Phookamsak, R.,Hyde, K. D.,Manawasinghe, I. S.. 2016

[20]Botryosphaeriaceae: Current status of genera and species. Dissanayake, A. J.,Li, X. H.,Phillips, A. J. L.,Dissanayake, A. J.,Hyde, K. D.. 2016

作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：北京市农林科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台