1High-Quality Genomes and High-Density Genetic Map Facilitate the Identification of Genes From a Weedy Rice

作者： Li, Fei; Han, Zhenyun; Qiao, Weihua; Wang, Junrui; Song, Yue; Cui, Yongxia; Li, Jiaqi; Ge, Jinyue; Lou, Danjing; Fan, Weiya; Cheng, Yunlian; Zhang, Lifang; Zheng, Xiaoming; Yang, Qingwen; Wang, Junrui; Cui, Yongxia; Li, Jiaqi; Li, Danting; Nong, Baoxuan; Zhang, Zongqiong; SCI

机构： Chinese Acad Agr Sci, Inst Crop Sci, Natl Key Facil Crop Gene Resources & Genet Improv, Beijing, Peoples R China; Guangxi Univ National, Sch Marine Sci & Biotechnol, Guangxi Key Lab Polysaccharide Mat & Modificat, Nanning, Peoples R China; Southwest Med Univ, Sch Clin Med, Luzhou, Peoples R China; Liaoning Inst Fruit Sci, Little Berry Res Room, Yingkou, Peoples R China; Guangxi Acad Agr Sci, Rice Res Inst, Guangxi Key Lab Rice Genet & Breeding, Nanning, Peoples R China;

来源：FRONTIERS IN PLANT SCIENCE

关键词： weedy rice; genetic map; QTL mapping; reference genome; comparative genomics

年份：2021

2Genome-wide selection and introgression of Chinese rice varieties during breeding

作者： Ge, Jinyue; Wang, Junrui; Li, Fei; Lou, Danjing; Fan, Weiya; Wang, Yanyan; Huang, Jingfen; Xing, Meng; Nie, Yamin; Xiao, Xiaorong; Zhang, Fan; Wang, Wensheng; Xu, Jianlong; Qiao, Weihua; Yang, Qingwen; Zheng, Xiaoming; Wang, Junrui; Pang, Hongbo; Liu, Ziran; Li, Jiaqi; Li, Danting; Nong, Baoxuan; Zhang, Zongqiong; Nie, Yamin; Xiao, Xiaorong; Zhang, Fan; Wang, Wensheng; Qiao, Weihua; Yang, Qingwen; Zheng, Xiaoming; Kim, Sung Ryul; Kohli, Ajay; Ye, Guoyou; Zheng, Xiaoming; Ye, Guoyou; Ye, Guoyou; SCI

机构： Chinese Acad Agr Sci, Inst Crop Sci, Natl Key Facil Crop Gene Resources & Genet Improv, Beijing 100081, Peoples R China; Guangxi Univ Nationalities, Sch Marine Sci & Biotechnol, Guangxi Key Lab Polysaccharide Mat & Modificat, Nanning 530006, Jiangsu, Peoples R China; Shenyang Normal Univ, Coll Life Sci, Shenyang 110034, Jilin, Peoples R China; Liaoning Inst Pomol, Yingkou 115009, Liaoning, Peoples R China; Guangxi Acad Agr Sci, Rice Res Inst, Nanning 530007, Guangxi, Peoples R China; Chinese Acad Agr Sci, Natl Nanfan Res Inst Sanya, Sanya 572000, Hainan, Peoples R China; Int Rice Res Inst, DAPO Box 7777, Manila, Philippines; Kyung Hee Univ, Crop Biotech Inst, Yongin 446701, South Korea; Kyung Hee Univ, Dept Genet Engn, Yongin 446701, South Korea;

来源：JOURNAL OF GENETICS AND GENOMICS

关键词： Rice; Genome selection; Introgression; Agronomic traits; Breeding

年份：2022

3Impact of linkage disequilibrium heterogeneity along the genome on genomic prediction and heritability estimation

作者： Ren, Duanyang; Cai, Xiaodian; Lin, Qing; Ye, Haoqiang; Teng, Jinyan; Li, Jiaqi; Zhang, Zhe; Ding, Xiangdong; SCI

机构： South China Agr Univ, Coll Anim Sci, Guangdong Prov Key Lab Agroanim Genom & Mol Breed, Guangzhou 510642, Peoples R China; China Agr Univ, Key Lab Anim Genet & Breeding, Natl Engn Lab Anim Breeding, Minist Agr & Rural Affairs,Coll Anim Sci & Techno, Beijing 100193, Peoples R China;

来源：GENETICS SELECTION EVOLUTION

年份：2022

4Strategies of carbon use and photosynthetic performance of the two seaweeds Gracilaria chouae and Gracilariopsis lemaneiformis under different conditions of the carbonate system

作者： Chen, Qionglin; Li, Jiaqi; Xue, Suyan; Xu, Han; Jiang, Zengjie; Fang, Jiangguang; Mao, Yuze; Chen, Qionglin; Li, Jiaqi; Xue, Suyan; Mao, Yuze; SCI

机构： Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Peoples R China; Pilot Natl Lab Marine Sci & Technol Qingdao, Funct Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China;

来源：ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS

关键词： Carbon use strategies; Gracilaria chouae; Gracilariopsis lemaneiformis; Photosynthesis; Seawater carbonate system

年份：2022

5Utilization Strategies of Two Environment Phenotypes in Genomic Prediction

作者： Lin, Qing; Teng, Jinyan; Cai, Xiaodian; Li, Jiaqi; Zhang, Zhe; SCI

机构： South China Agr Univ, Coll Anim Sci, Natl Engn Res Ctr Breeding Swine Ind,Lingnan Guan, Guangdong Prov Key Lab Agroanim Genom & Mol Breed, Guangzhou 510642, Peoples R China;

来源：GENES

关键词： genomic prediction; multiple environment phenotypes; genomic feature best linear unbiased prediction; multi-trait genomic best linear unbiased prediction; genome-wide association study; rice

年份：2022

6Plant Salinity Stress Response and Nano-Enabled Plant Salt Tolerance

作者： Li, Zengqiang; Zhu, Lan; Zhao, Fameng; Li, Jiaqi; Wu, Honghong; Li, Zengqiang; Zhang, Xin; Kong, Xiangjun; Zhang, Zhiyong; Wu, Honghong; Wu, Honghong; SCI

机构： Huazhong Agr Univ, Coll Plant Sci & Technol, MOA Key Lab Crop Ecophysiol & Farming Syst Middle, Wuhan, Peoples R China; Henan Inst Sci & Technol, Henan Collaborat Innovat Ctr Modern Biol Breeding, Xinxiang, Peoples R China; Huazhong Agr Univ, Shenzhen Inst Nutr & Hlth, Shenzhen, Peoples R China; Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Minist Agri,Genome Anal Lab, Guangdong Lab Lingnan Modern Agr,Shenzhen Branch, Shenzhen, Peoples R China;

来源：FRONTIERS IN PLANT SCIENCE

关键词： mechanisms; nanomaterials; phytohormones; reactive oxygen species; salt tolerance; Na+; K+ homeostasis

年份：2022

7Insights into the architecture of human-induced polygenic selection in Duroc pigs

作者： Chen, Zitao; Teng, Jinyan; Diao, Shuqi; Xu, Zhiting; Ye, Shaopan; Zhang, Zhe; Li, Jiaqi; Chen, Zitao; Zhang, Zhe; Pan, Yuchun; Ye, Shaopan; Qiu, Dingjie; Zhang, Qin; SCI

机构： South China Agr Univ, Coll Anim Sci, Natl Engn Res Ctr Breeding Swine Ind, Guangdong Prov Key Lab Agroanim Genom & Mol Breed, Guangzhou 510642, Peoples R China; Zhejiang Univ, Coll Anim Sci, Dept Anim Sci, 866 Yuhangtang Rd, Hangzhou 310058, Peoples R China; Shantou Univ, Guangdong Prov Key Lab Marine Biotechnol, 243 Daxue Rd, Shantou 515063, Peoples R China; Fujian Yongcheng Agr & Anim Husb Sci Tech Grp Co, Fuqing 350399, Peoples R China; Shandong Agr Univ, Coll Anim Sci & Technol, Dept Anim Genet & Breeding, Tai An 271018, Shandong, Peoples R China;

来源：JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY

关键词： Artificial selection; GWAS; Pig; Reproductive organ; Selection signatures

年份：2022

8Structural Insights into Alphavirus Assembly Revealed by the Cryo-EM Structure of Getah Virus

作者： Wang, Ming; Sun, Zhenzhao; Wang, Shida; Yang, Decheng; Shi, Zhibin; Wei, Xinyu; Wang, Pengfei; Sun, Weiyao; Zhu, Jing; Li, Jiaqi; Du, Bingchen; Liu, Zaisi; Wei, Lili; Liu, Chunguo; He, Xijun; Wang, Jingfei; Cui, Chenxi; Wang, Xiangxi; Zhang, Xinzheng; SCI

机构： Chinese Acad Agr Sci, Harbin Vet Res Inst, State Key Lab Vet Biotechnol, Harbin 150036, Peoples R China; Chinese Acad Sci, Inst Biophys, CAS Ctr Excellence Biomacromol, Natl Lab Biomacromol, Beijing 100101, Peoples R China;

来源：VIRUSES-BASEL

关键词： alphavirus; Getah virus; cryo-EM; viral assembly; block-based reconstruction

年份：2022

9Model Comparison of Heritability Enrichment Analysis in Livestock Population

作者： Cai, Xiaodian; Teng, Jinyan; Ren, Duanyang; Zhang, Hao; Li, Jiaqi; Zhang, Zhe; SCI

机构： South China Agr Univ, Coll Anim Sci, Guangdong Prov Key Lab Agroanim Genom & Mol Breed, Guangzhou 510642, Peoples R China;

来源：GENES

关键词： heritability enrichment; genetic architecture; LD; livestock; complex trait

年份：2022

10GPOPSIM: a simulation tool for whole-genome genetic data

作者： Zhang, Zhe; Li, Jiaqi; Li, Xiujin; Ding, Xiangdong; Zhang, Qin; SCI

机构： South China Agr Univ, Coll Anim Sci, Guangdong Prov Key Lab Agroanim Genom & Mol Breed, Guangzhou 510642, Guangdong, Peoples R China; China Agr Univ, Coll Anim Sci & Technol, Natl Engn Lab Anim Breeding, Key Lab Anim Genet & Breeding,Minist Agr, Beijing 100193, Peoples R China;

来源：BMC GENETICS

关键词： Data simulation SNP Pedigree Multiple traits Mutation-drift equilibrium Genetic correlation

年份：2015