Discovery of Sex-Determining Genes in Portunus trituberculatus: A Comparison of Male and Female Transcriptomes During Early Developmental Stages
文献类型: 外文期刊
第一作者: Zhang, Wen
作者: Zhang, Wen;Lv, Jianjian;Lan, Weikang;Gao, Baoquan;Liu, Ping;Zhang, Wen;Lv, Jianjian;Lan, Weikang;Gao, Baoquan;Liu, Ping
作者机构:
关键词: Portunus trituberculatus; transcriptome; sex-determining; Dmrt; PtDMY
期刊名称:FRONTIERS IN MARINE SCIENCE ( 影响因子:5.247; 五年影响因子:5.72 )
ISSN:
年卷期: 2022 年 8 卷
页码:
收录情况: SCI
摘要: Portunus trituberculatus is one of the main mariculture crabs of high economic value. To identify genes involved in sex determination, we first performed sex-specific transcriptome sequencing at six larval development stages using a DNA/RNA co-extraction method. A total of 907,952,938 and 828,774,880 reads were obtained from female and male crabs, respectively. 2,379 differentially expressed genes (DEGs) were found between females and males, and were mainly enriched in DNA replication, folate biosynthesis, and retinol metabolism pathways. Furthermore, transcription patterns of genes in the sex-determining region (SD) were analyzed based on the transcriptome data, and one Dmrt gene (PtDMY) was found to be exclusively expressed in males during early developmental stages. Notably, some known sex-related genes, including IAG, Dmrt11E, DmrtB1, and DmrtC2 were significantly down-regulated after knocking down PtDMY. Our results suggested that PtDMY is involved in sex determination and may be one of the key upstream regulators of the sex determination pathway. In addition, the massive volume of transcriptome data obtained in this study provided an important basis for the systematic study of sex determination mechanisms in P. trituberculatus.
分类号:
- 相关文献
作者其他论文 更多>>
-
Development of an enhanced hybrid attention YOLOv8s small object detection method for phenotypic analysis of root nodules
作者:Zhao, Ya;Zhang, Wen;Zhang, Liangxiao;Tang, Xiaoqian;Wang, Du;Zhang, Qi;Li, Peiwu;Tang, Xiaoqian;Zhang, Qi;Li, Peiwu;Zhao, Ya;Li, Peiwu
关键词:Root nodules; YOLOv8s; Hybrid attention mechanism; Small object detection; Phenotypic characteristics
-
Partial replacement by ammonium nutrition enhances Brassica napus growth by promoting root development, photosynthesis, and nitrogen metabolism
作者:Zhang, Wen;Munyaneza, Venuste;Wang, Dandan;Huang, Chenfeng;Wu, Siyuan;Han, Mingcun;Ding, Guangda;Wang, Xu;Kant, Surya
关键词:Brassica napus; Ammonium; Nitrate; Photosynthesis; Nitrogen metabolism
-
Deciphering the Proteome and Phosphoproteome of Peanut (Arachis hypogaea L.) Pegs Penetrating into the Soil
作者:Yang, Sha;He, Mei;Tang, Zhaohui;Liu, Keke;Wang, Jianguo;Cui, Li;Guo, Feng;Zhang, Jialei;Wan, Shubo;Liu, Ping
关键词:peanut (
Arachis hypogaea L.); pegs; pod development; protein phosphorylation; stress resistance -
Elucidating the role of DNA methylation in low-salinity adaptation of the swimming crab Portunus trituberculatus
作者:Guo, Junyang;Lv, Jianjian;Sun, Dongfang;Liu, Ping;Gao, Baoquan;Guo, Junyang;Lv, Jianjian;Liu, Ping;Gao, Baoquan
关键词:Portunus trituberculatus; DNA methylation; Gill; Low salinity; Molecular mechanisms
-
Functions of the transcription factor myb-like in sex determination and differentiation in Portunus trituberculatus
作者:Jia, Shaoting;Lan, Weikang;Huang, Yuchao;Su, Yichen;Gao, Baoquan;Liu, Ping;Lv, Jianjian;Gao, Baoquan;Liu, Ping;Lv, Jianjian;Jia, Shaoting;Lan, Weikang;Huang, Yuchao;Su, Yichen;Gao, Baoquan;Liu, Ping;Lv, Jianjian
关键词:Portunus trituberculatus; Sex determination and differentiation; Myb-like
-
Unravelling the gene regulatory network linking red leaf and red flesh traits in teinturier grape
作者:Li, Haoran;Zheng, Huan;Tao, Jianmin;Li, Haoran;Zhang, Yi;Sun, Chenxu;Huang, Liyuan;Dong, Yang;Yang, Yaxin;Li, Hui;Zheng, Huan;Tao, Jianmin;Zhang, Wen;Tao, Jianmin
关键词:Anthocyanins; Low-temperature; Grape leaf; Teinturier grape; Plant transformation
-
Screening and identification of protein interacting with goose astrovirus
作者:Qian, Lingling;Liu, Yuwei;Wang, Xiaochun;Yang, Shixing;Ji, Likai;Zhang, Wen;Shen, Quan;Sun, Xiaopeng;Wang, Jianqiang;Shan, Tongling;Zhang, Wen;Shen, Quan
关键词:astrovirus; VOPBA; LMH cell; HSPA5; protein molecular docking