A chromosome-level genome for the flower thrips Frankliniella intonsa

文献类型: 外文期刊

第一作者: Song, Wei

作者: Song, Wei;Wang, Jia-Xu;Cao, Li-Jun;Chen, Jin-Cui;Wei, Shu-Jun;Wang, Jia-Xu;Chen, Min;Bao, Wen-Xue

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期刊名称:SCIENTIFIC DATA ( 影响因子:9.8; 五年影响因子:10.8 )

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年卷期: 2024 年 11 卷 1 期

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收录情况: SCI

摘要: The flower thrips Frankliniella intonsa (Thysanoptera: Thripidae) is a common insect found in flowers of many plants. Sometimes, F. intonsa causes damage to crops through direct feeding and transmission of plant viruses. Here, we assembled a chromosomal level genome of F. intonsa using the Illumina, Oxford Nanopore (ONT), and Hi-C technologies. The assembled genome had a size of 209.09 Mb, with a contig N50 of 997 bp, scaffold N50 of 13.415 Mb, and BUSCO completeness of 92.5%. The assembled contigs were anchored on 15 chromosomes. A set of 14,109 protein-coding genes were annotated in the genome with a BUSCO completeness of 95.0%. The genome contained 491 non-coding RNA and 0.57% of interspersed repeats. This high-quality genome provides a valuable resource for understanding the ecology, genetics, and evolution of F. intonsa, as well as for controlling thrips pests.

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