A split single-stranded DNA activator-based Cas12a fluorescence biosensor for specific H1N1 detection

文献类型: 外文期刊

第一作者: Xu, Yao

作者: Xu, Yao;Pei, Nannan;Zhang, Wenhui;Xu, Yao;Zhou, Hongyu;Bu, Shengjun;Hao, Zhuo;Wan, Jiayu;Bu, Shengjun

作者机构:

关键词: Virus detection; Three-way junction; Isothermal amplification; CRISPR/Cas12a; Fluorescence signal

期刊名称:MICROCHEMICAL JOURNAL ( 影响因子:4.8; 五年影响因子:4.5 )

ISSN: 0026-265X

年卷期: 2024 年 201 卷

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收录情况: SCI

摘要: We developed a novel CRISPR/Cas12a fluorescence biosensor to specifically detect the H1N1 virus based on splitting single-stranded DNA (ssDNA) activators. Specifically, activators 1 and 2 were generated from dual target nucleic acid sites to induce a three-way junction (3WJ) isothermal amplification process. Two specific H1N1 RNA nucleic acid sites were bound to a set of probes to form a 3WJ, which facilitated repeated extension and nicking reactions to produce high levels of split ssDNA activators via DNA polymerase and nicking endonuclease activity. Amplified activators 1 and 2 fully assembled with Cas12a/crRNA to form complexes. Activated Cas12a transcleaved ssDNA reporter molecules to generate fluorescence signals. Under optimal conditions, biosensor dynamic detection range was 1 pM-10 nM, and the detection limit was 205 fM. Thus, our biosensor showed high specificity, reliability, and robustness, which highlights its potential use for H1N1 diagnostics.

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