The Marchantia polymorpha pangenome reveals ancient mechanisms of plant adaptation to the environment

文献类型： 外文期刊

第一作者： Beaulieu, Chloe

作者： Beaulieu, Chloe;Libourel, Cyril;Zamar, Duchesse Lacourt Mbadinga;El Mahboubi, Karima;Keller, Jean;Girou, Camille;San Clemente, Helene;Amblard, Emilie;Castel, Baptiste;Jacquet, Christophe;Dunand, Christophe;Bonhomme, Maxime;Delaux, Pierre-Marc;Hoey, David J.;Greiff, George R. L.;Schornack, Sebastian;Diop, Issa;Szovenyi, Peter;Diop, Issa;Szovenyi, Peter;Theron, Anthony;Cauet, Stephane;Rodde, Nathalie;Zachgo, Sabine;Halpape, Wiebke;Meierhenrich, Anja;Laker, Bianca;Braeutigam, Andrea;Halpape, Wiebke;Meierhenrich, Anja;Laker, Bianca;Braeutigam, Andrea;Cheng, Shifeng;Tanizawa, Yasuhiro;Aziz, Simon;Philippe, Herve;Leebens-Mack, James H.;Schmutz, Jeremy;Webber, Jenell;Grimwood, Jane;Schmutz, Jeremy;Nelson, Jessica M.;Roux, Fabrice;Libourel, Cyril;Greiff, George R. L.

作者机构：

期刊名称：NATURE GENETICS （ 影响因子：29.0； 五年影响因子：37.4 ）

ISSN： 1061-4036

年卷期： 2025 年 57 卷 3 期

页码：

收录情况： SCI

摘要： Plant adaptation to terrestrial life started 450 million years ago and has played a major role in the evolution of life on Earth. The genetic mechanisms allowing this adaptation to a diversity of terrestrial constraints have been mostly studied by focusing on flowering plants. Here, we gathered a collection of 133 accessions of the model bryophyte Marchantia polymorpha and studied its intraspecific diversity using selection signature analyses, a genome-environment association study and a pangenome. We identified adaptive features, such as peroxidases or nucleotide-binding and leucine-rich repeats (NLRs), also observed in flowering plants, likely inherited from the first land plants. The M. polymorpha pangenome also harbors lineage-specific accessory genes absent from seed plants. We conclude that different land plant lineages still share many elements from the genetic toolkit evolved by their most recent common ancestor to adapt to the terrestrial habitat, refined by lineage-specific polymorphisms and gene family evolution.

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