Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of obscure puffer (Takifugu obscurus) and cross-species amplification

文献类型： 外文期刊

第一作者： Ma, Hongyu

作者： Ma, Hongyu;Chen, Songlin;Liao, Xiaolin;Xu, Tianjun;Ma, Hongyu;Ge, Jiachun

作者机构：

关键词： Obscure puffer;Takifugu obscurus;Microsatellite;Enriched genomic library

期刊名称：CONSERVATION GENETICS （ 影响因子：2.538； 五年影响因子：2.32 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Obscure puffer (Takifugu obscurus) is an anadromous fish species in China. Here, we reported 10 polymorphic microsatellite loci isolated from a dinucleotide-enriched genomic library of T. obscurus. The number of alleles, observed and expected heterozygosity per locus in 30 individuals ranged from four to 10, from 0.57 to 0.86 and from 0.68 to 0.90, respectively. Three loci significantly deviated from Hardy-Weinberg equilibrium after Bonferroni correction and no significant linkage disequilibrium between pairs of loci was found. Cross-species amplification of these microsatellite loci in additional three fish species was performed. These polymorphic microsatellite loci would be useful for investigating genetic population structure and construction of genetic linkage map in T. obscurus.

分类号： Q3

  • 相关文献

[1]New polymorphic microsatellite markers for bluefin leatherjacket (Navodon septentrionalis Gunther, 1877). Xu, Gen-Bo,Chen, Song-Lin,Tian, Yong-Sheng,Xu, Gen-Bo.

[2]Twelve polymorphic microsatellite loci from a dinucleotide-enriched genomic library of Japanese Spanish mackerel (Scomberomorus niphonius). Xing, Shi-Chao,Xu, Gen-Bo,Liao, Xiao-Lin,Chen, Song-Lin,Xing, Shi-Chao,Yang, Guan-Pin.

[3]Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of spotted maigre (Nibea albiflora). Xing, Shichao,Shao, Changwei,Liao, Xiaolin,Tian, Yongsheng,Chen, Songlin,Xing, Shichao.

[4]Isolation and charaterization of polymorphic microsatellite loci from so-iuy mullet (Mugil soiuy Basilewsky 1855). Xu, Genbo,Shao, Changwei,Liao, Xiaolin,Tian, Yongsheng,Chen, Songlin,Xu, Genbo.

[5]Isolation and characterization of polymorphic microsatellite loci from bluefin leatherjacket (Navodon septentrionalis Gunther, 1877). Xu, Gen-Bo,Tian, Yong-Sheng,Liao, Xiao-Lin,Chen, Song-Lin,Xu, Gen-Bo.

[6]Isolation and charaterization of 12 dinucleotide microsatellite loci from Belenger's jewfish (Johnius belengerii Cuvier 1830). Xu, Genbo,Shao, Changwei,Liao, Xiaolin,Tian, Yongsheng,Chen, Songlin,Xu, Genbo.

[7]The protective effects of vitamin C on apoptosis, DNA damage and proteome of pufferfish (Takifugu obscurus) under low temperature stress. Cheng, Chang-Hong,Liang, Hai-Yan,Luo, Sheng-Wei,Wang, An-Li,Ye, Chao-Xia. 2018

[8]Immune and physiological responses of pufferfish (Takifugu obscurus) under cold stress. Cheng, Chang-Hong,Guo, Zhi-Xun,Ye, Chao-Xia,Wang, An-Li,Guo, Zhi-Xun.

[9]Effects of high temperature on biochemical parameters, oxidative stress, DNA damage and apoptosis of pufferfish (Takifugu obscurus). Cheng, Chang-Hong,Guo, Zhi-Xun,Luo, Sheng-Wei,Wang, An-Li,Guo, Zhi-Xun. 2018

[10]Molecular and immune response characterizations of a novel Bax inhibitor-1 gene in pufferfish, Takifugu obscurus. Cheng, Chang-Hong,Guo, Zhi-Xun,Luo, Sheng-Wei,Wang, An-Li,Guo, Zhi-Xun.

[11]Effect of dietary astaxanthin on the growth performance, non-specific immunity, and antioxidant capacity of pufferfish (Takifugu obscurus) under high temperature stress. Cheng, Chang-Hong,Guo, Zhi-Xun,Cheng, Chang-Hong,Guo, Zhi-Xun,Ye, Chao-Xia,Wang, An-Li,Ye, Chao-Xia,Wang, An-Li. 2018

[12]Transcriptome analysis reveals the potential mechanism of the albino skin development in pufferfish Takifugu obscurus. Jin, Wu,Wen, Haibo,Gu, Ruobo,Jin, Wu,Du, Xingwei,Zheng, Jinliang.

[13]Development of 15 novel dinucleotide microsatellite markers in the Senegalese sole Solea senegalensis. Chen, Song-Lin,Shao, Chang-Wei,Xu, Gen-Bo,Liao, Xiao-Lin,Tian, Yong-Sheng. 2008

[14]Rapid isolation and characterization of microsatellites from the genome of pearl oyster (Pinctada martensi Dunker). Kuang, Youyi,Tong, Guangxiang,Yan, Xuechun,Sun, Xiaowen. 2009

[15]Polymorphic dinucleotide microsatellites in tongue sole (Cynoglossus semilaevis). Liao, X.,Shao, C. W.,Tian, Y. S.,Chen, S. L.. 2007

[16]Isolation and characterization of 10 polymorphic microsatellite loci from small yellow croaker (Pseudosciaena polyactis). Chen, Song-Lin,Xing, Shi-Chao,Xu, Gen-Bo,Liao, Xiaolin,Yang, Jing-Feng,Xing, Shi-Chao. 2009

[17]Twelve novel polymorphic microsatellite loci for the Yellow grouper (Epinephelus awoara) and cross-species amplifications. Zhao, Lili,Shao, Changwei,Liao, Xiaolin,Ma, Hongyu,Chen, Songlin,Zhao, Lili,Zhu, Xuechun.

[18]Isolation and characterization of 30 novel polymorphic microsatellite loci from Japanese halfbeak, Hyporhamphus sajori (Temminck et Schlegel, 1846). Xing, Shi-Chao,Xu, Gen-Bo,Liu, Shan-Shan,Liao, Xiao-Lin,Tian, Yong-sheng,Chen, Song-Lin,Xing, Shi-Chao,Yang, Guan-Pin.

[19]Isolation and characterization of polymorphic microsatellite loci from a dinucleotide-enriched genomic library of seven-band grouper (Epinephelus septemfasciatus) and cross-species amplification. Zhao, Lili,Shao, Changwei,Liao, Xiaolin,Chen, Songlin,Zhao, Lili.

[20]Isolation and characterization of 12 polymorphic microsatellite markers from ladyfish (Elops saurus Linnaeus). Sha, Zhen-Xia,Xing, Shi-Chao,Shao, Chang-Wei,Tian, Yong-Sheng,Liao, Xiao-Lin,Chen, Song-Lin,Xing, Shi-Chao.

作者其他论文 更多>>

微信小程序