Nucleosome-Omics: A Perspective on the Epigenetic Code and 3D Genome Landscape

文献类型: 外文期刊

第一作者: Kong, Siyuan

作者: Kong, Siyuan;Lu, Yuhui;Tan, Shuhao;Li, Rongrong;Gao, Yan;Li, Kui;Zhang, Yubo

作者机构:

关键词: epigenetics; nucleosomes; MNase-seq; Micro-C; 3D genome

期刊名称:GENES ( 影响因子:4.141; 五年影响因子:4.474 )

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年卷期: 2022 年 13 卷 7 期

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收录情况: SCI

摘要: Genetic information is loaded on chromatin, which involves DNA sequence arrangement and the epigenetic landscape. The epigenetic information including DNA methylation, nucleosome positioning, histone modification, 3D chromatin conformation, and so on, has a crucial impact on gene transcriptional regulation. Out of them, nucleosomes, as basal chromatin structural units, play an important central role in epigenetic code. With the discovery of nucleosomes, various nucleosome-level technologies have been developed and applied, pushing epigenetics to a new climax. As the underlying methodology, next-generation sequencing technology has emerged and allowed scientists to understand the epigenetic landscape at a genome-wide level. Combining with NGS, nucleosome-omics (or nucleosomics) provides a fresh perspective on the epigenetic code and 3D genome landscape. Here, we summarized and discussed research progress in technology development and application of nucleosome-omics. We foresee the future directions of epigenetic development at the nucleosome level.

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