The characteristics and analysis of the complete chloroplast genome of Hemerocallis cultivar Small orange lamp 2019 (Asphodelaceae)
文献类型: 外文期刊
第一作者: Zhang, Xiaofei
作者: Zhang, Xiaofei;Yang, Jiaming;Shang, Xuwen;Chai, Shengyue;Hou, Xiaolei;Lang, Lixin;Jiang, Lanling;Wang, Zhenting
作者机构:
关键词: Chloroplast genome; Asphodelaceae; Hemerocallis cultivar Small orange lamp; phylogenetic analysis
期刊名称:MITOCHONDRIAL DNA PART B-RESOURCES ( 影响因子:0.7; 五年影响因子:0.6 )
ISSN:
年卷期: 2024 年 9 卷 12 期
页码:
收录情况: SCI
摘要: Hemerocallis cultivar Small orange lamp is a hybrid variety. Its whole chloroplast genome was 156,053 bp in size, consisting of 135 genes in total, including 89 mRNA genes, 38 tRNA genes, and 8 rRNA genes. The chloroplast genome contained a large single copy region (LSC 84,805 bp), a small single copy region (SSC 18,510 bp) and a pair of inverted repeats (IRa and IRb 26,369 bp). The overall GC content was 37.34%. Phylogenetic analysis showed that Hemerocallis lilioasphodelus and H. cultivar Small orange lamp are most closely related. This will provide valuable reference for further research on the genetic information of plants in the Hemerocallis.
分类号:
- 相关文献
作者其他论文 更多>>
-
Pan-genome and haplotype map of cassava cultivars and wild ancestors provide insights into its adaptive evolution and domestication
作者:Xia, Zhiqiang;Zhou, Xincheng;Jiang, Sirong;Chen, Fei;Zou, Meiling;Xu, Liangye;Guo, Xin;Wang, Shujuan;Li, Mengtao;Liu, Shisheng;Bao, Yuting;Zhang, Chenji;Xiao, Jianjia;Guo, Fengguang;Shen, Xu;Li, Haozheng;Zhang, Huaifang;He, Shuang;Wan, Yinglang;Chen, Yinhua;Huang, Dongyi;Li, Bin;Peng, Ming;Chen, Xin;Wang, Wenquan;Du, Zhenglin;Chen, Meili;Zhao, Wenming;Xiao, Jingfa;Du, Zhenglin;Chen, Meili;Zhao, Wenming;Xiao, Jingfa;Zhou, Xincheng;Wang, Haiyan;Lu, Cheng;Peng, Ming;Chen, Xin;Zhu, Tingting;Wang, Le;Luo, Ming-Cheng;Qiao, Fei;Li, Kaimian;Carvalho, Luiz;Lopez-Lavalle, Luis Augusto Becerra;Zhang, Xiaofei;Ceballos, Hernan;Wang, Zhenyu;Li, Yuanchao;Zhao, Long;Yan, Huabing;Qin, Xiaochun;Ma, Ling;Zhang, Weixiong;Moller, Birger Lindberg
关键词:genome; pan-genome; structural variations; selective sweeping; evolution and domestication; cassava
-
Genome-Wide Association Study and Candidate Gene Identification for Girth Traits in Rubber Tree
作者:Li, Wenxiu;Ouyang, Huan;Zhang, Hualin;Yan, Qing;Ye, Yana;Luo, Ping;Zhang, Zishan;Xie, Ruihong;Cheng, Han;Zhang, Xiaofei;Gao, Xinsheng;He, Junjun;Yi, Yingtao;Li, Pingsheng
关键词:rubber tree; growth traits; genome-wide association analysis; candidate genes
-
Tetraploidization Altered Phenotypic Traits and Metabolite Profile of Java Ginseng (Talinum paniculatum (Jacq.) Gaertn.)
作者:Liu, Yingying;Huang, Xiao;Gao, Xinsheng;Zhang, Xiaofei;Huang, Huasun;Li, Weiguo;Zhang, Yuanyuan
关键词:tetraploidization; phenotypical changes; biomass; metabolites
-
Functional validation of AaCaM3 response to high temperature stress in Amorphophallus albus
作者:Niu, Yi;Liu, Quanshuo;Zhang, Xu;Niu, Yi;Zhou, Zixuan;Yue, Zhenyu;Zhang, Xiaofei;Hu, Lingyu;Liu, Quanshuo;Zhang, Xu;Niu, Yi;Zhou, Zixuan;Yue, Zhenyu;Zhang, Xiaofei;Hu, Lingyu;Liu, Quanshuo;Zhang, Xu;Jiang, Xuekuan;Dong, Kun
关键词:Amorphophallus Albus; AaCaM3; Promoter-protein interaction; Heat stress
-
Unraveling the Anthocyanin Regulatory Mechanisms of White Mutation in Verbena stricta by Integrative Transcriptome and Metabolome Analysis
作者:Chai, Shengyue;Yang, Jiaming;Zhang, Xiaofei;Shang, Xuwen;Lang, Lixin
关键词:
Verbena stricta ; mutation; transcriptome; pigmentation; anthocyanins -
Mycoplasma synoviae surface-located elongation factor G functions as a cytoadhesin to promote adhesion to synovial sheath cells through binding to vimentin
作者:Xu, Bin;Wang, Shu;Yao, Weiping;Yuan, Ting;Ma, Sunting;Wang, Xiaoli;Lyu, Lixin;Yu, Yanfei;Zhang, Xiaofei;Shao, Guoqing;Ouyang, Wei;Xiong, Qiyan;Feng, Zhixin;Xu, Bin;Yuan, Ting;Ma, Sunting;Wang, Xiaoli;Lyu, Lixin;Yu, Yanfei;Zhang, Xiaofei;Shao, Guoqing;Ouyang, Wei;Xiong, Qiyan;Feng, Zhixin;Xu, Bin;Sun, Yu;Wang, Shu;Yu, Yanfei;Ouyang, Wei;Xiong, Qiyan;Feng, Zhixin;Xu, Bin;Xiong, Qiyan;Feng, Zhixin;Xu, Bin;Yao, Weiping;Wang, Qing;Feng, Zhixin;Sun, Yu
关键词:Mycoplasma synoviae; Elongation factor G; Synovial sheath cells; Vimentin; Adhesion
-
McAPRR2: The Key Regulator of Domesticated Pericarp Color in Bitter Gourd
作者:Tian, Shouwei;Yang, Jingjing;Fu, Yiqian;Zhang, Xiaofei;Zhang, Jian;Zhao, Hong;Hu, Qi;Liu, Pangyuan;He, Weiming;Han, Xiangyang;Wen, Changlong
关键词:Momordica charantia; McAPRR2; pericarp color; haplotype; domestication