Chromosome-level assembly and evolution analysis of the Trichosanthes truncata genome
文献类型: 外文期刊
第一作者: Hu, Ying
作者: Hu, Ying;Wei, Xiaomei;Wei, Fan;Peng, Yude;Huang, Baoyou;Wei, Kunhua;Hu, Ying;Wei, Xiaomei;Wei, Fan;Wei, Kunhua;Chu, Zhuannan;Dong, Ling;Li, Weiwen
作者机构:
期刊名称:SCIENTIFIC DATA ( 影响因子:5.8; 五年影响因子:8.9 )
ISSN:
年卷期: 2024 年 11 卷 1 期
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收录情况: SCI
摘要: Trichosanthes truncata C. B. Clarke, an important medicinal plant, is a dioecious plant belonging to the Cucurbitaceae family. This study presents a chromosomal-level reference genome assembly for T. truncata. Through the integration of PacBio high-fidelity sequencing and high-throughput chromosome conformation capture technology, a final genome sequence of 637.41 Mb was assembled, with an N50 of 57.24 Mb and consisting of 11 pseudochromosomes. Additionally, 97.21 Mb of repetitive sequences and 36,172 protein-coding genes were annotated. This high-quality genome assembly is of utmost significance for studying the molecular mechanisms underlying the biosynthesis of bioactive compounds. Furthermore, this study provided valuable insights into plant comparative genomics research.
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