Differentiation and evolution among geographic and seasonal eco-populations of soybean germplasm in Southern China
文献类型: 外文期刊
第一作者: Su, Yanzhu
作者: Su, Yanzhu;Xing, Guangnan;Wang, Wubin;Gai, Junyi;Zeng, Weiying;Cai, Zhaoyan;Lai, Zhenguang;Sun, Zudong
作者机构:
关键词: allele-richness; cluster analysis
期刊名称:CROP & PASTURE SCIENCE ( 影响因子:2.286; 五年影响因子:2.507 )
ISSN: 1836-0947
年卷期: 2019 年 70 卷 2 期
页码:
收录情况: SCI
摘要: Soybean (Glycine max (L.) Merrill) germplasm in Southern China is extremely diverse. In order to explore the differentiation and evolution among geographic sowing-seasonal ecotypes of the Southern China Soybean Germplasm Population (SCSGP), we tested a sample set of accessions comprising 359 of the spring-sowing (SP) ecotype and 341 of the summer-autumn-sowing (SA) ecotype for their flowering date and sensitivity to seasonal photo-thermal changes in Nanning, Guangxi, China. The sample set and another 175 wild annual accessions were genotyped with 60 representative simple sequence repeat (SSR) markers. The SCSGP is characterised by its geographic differentiation (four geo-regional ecotypes), especially its sowing-seasonal differentiation (SA and SP ecotypes), and their combinations (eight geo-seasonal eco-populations). The ecological differentiation coincided with genetic differentiation in terms of allele richness and genetic distance. Neighbour-joining clustering among accessions by using SSRs indicated SA varieties to be the primitive ecotype relative to SP. TheSA ecotype of Eco-region III (SA-III) was the most primitive among the eight geo-seasonal ecopopulations, from which evolved SA-IV, and then SA-VI and SA-V. The SP ecotype was mainly evolved from its older SA counterpart, starting from SP-III emerging from SA-III accompanied by its introduction to Eco-region IV and other boarder regions. The evolutionary relationship among the geo-seasonal eco-populations was validated further with the analysis of multi-population specific-present alleles, which supports the hypothesis of Southern China origin of cultivated soybeans.
分类号:
- 相关文献
作者其他论文 更多>>
-
The GmSTF1/2-GmBBX4 negative feedback loop acts downstream of blue-light photoreceptors to regulate isoflavonoid biosynthesis in soybean
作者:Song, Zhaoqing;Zhao, Fengyue;Chu, Li;Lin, Huan;Xiao, Yuntao;Fang, Zheng;Yu, Deyue;Gai, Junyi;Xu, Dongqing;Wang, Xuncheng;Dong, Jie;Lyu, Xiangguang;Liu, Bin
关键词:photoreceptor; light signaling; isoflavonoid; GmSTF; GmBBX4; soybean
-
Identification of Gene-Allele System Conferring Alkali-Tolerance at Seedling Stage in Northeast China Soybean Germplasm
作者:Zong, Chunmei;Zhao, Jinming;Wang, Lei;Chen, Zaoye;Wang, Wubin;Gai, Junyi;Zong, Chunmei;Zhao, Jinming;Wang, Lei;Chen, Zaoye;Wang, Wubin;Gai, Junyi;Zong, Chunmei;Zhao, Jinming;Wang, Lei;Chen, Zaoye;Wang, Wubin;Gai, Junyi;Zong, Chunmei;Zhao, Jinming;Wang, Lei;Chen, Zaoye;Wang, Wubin;Gai, Junyi;Zong, Chunmei;Zhao, Jinming;Wang, Lei;Chen, Zaoye;Wang, Wubin;Gai, Junyi;Zong, Chunmei;Zhao, Jinming;Wang, Yanping;Wang, Lei;Qi, Yuxin;Bai, Yanfeng;Li, Wen;Wang, Wubin;Ren, Haixiang;Du, Weiguang;Gai, Junyi
关键词:alkali tolerance; gene-allele matrix; gene-allele sequence marker (GASM); gene function; Northeast China soybean germplasm population (NECSGP); optimal cross design; restricted two-stage multilocus genome-wide association study (RTM-GWAS); soybean (Glycine max (L.) Merr.)
-
Genome-wide association with transcriptomics reveals a shade-tolerance gene network in soybean
作者:Su, Yanzhu;Hao, Xiaoshuai;Pan, Yongpeng;Wang, Can;Guo, Pengfei;Zhang, Zhipeng;He, Jianbo;Xing, Guangnan;Wang, Wubin;Zhang, Jiaoping;Gai, Junyi;Zeng, Weiying;Lai, Zhenguang;Sun, Zudong
关键词:Soybean(Glycine max (L.) Merr.); Shade-tolerance; Restricted two-stage multi-locus genome-wide association study based on gene/allele sequence markers (GASM-RTM-GWAS); Shade-tolerance index (STI); Relative cell length (RCL); Transcriptome
-
Effects of DHAV-3 infection on innate immunity, antioxidant capacity, and lipid metabolism in ducks with different DHAV-3 susceptibilities
作者:Cao, Junting;Zhang, Yunsheng;Zhang, Bo;Chen, Ying;Xing, Guangnan;Wu, Yongbao;Zhou, Zhengkui;Hou, Shuisheng;Cao, Junting;Liu, Xiaolin;Cao, Junting;Wu, Yongbao
关键词:DHAV-3; oxidative stress; lipid metabolism; immune response; apoptosis
-
Whole-transcriptome sequencing revealed the role of noncoding RNAs in susceptibility and resistance of Pekin ducks to DHAV-3
作者:Ding, Dingbang;Zhao, Haonan;Liu, Ying;Li, Shaofei;Wang, Xia;Wei, Jie;Wang, Shuaiqin;Xing, Guangnan;Hou, Shuisheng;Zhang, Yunsheng;Yang, Yuze
关键词:Pekin duck; DHAV-3; metabolism; immunity; ncRNA
-
Effects of age on differential resistance to duck hepatitis A virus genotype 3 in Pekin ducks by 16 S and transcriptomics
作者:Liang, Suyun;Lu, Meixi;Yu, Daxin;Xing, Guangnan;Ji, Zhanqing;Guo, Zhanbao;Zhang, Qi;Huang, Wei;Xie, Ming;Hou, Shuisheng;Hou, Shuisheng
关键词:Pekin duck; Intestinal microbiota; Age; DHAV-3; Resistance differences
-
Accurately estimate soybean growth stages from UAV imagery by accounting for spatial heterogeneity and climate factors across multiple environments
作者:Che, Yingpu;Gu, Yongzhe;Bai, Dong;Li, Delin;Li, Jindong;Li, Ying-hui;Jin, Xiuliang;Qiu, Li-juan;Che, Yingpu;Li, Jindong;Li, Ying-hui;Jin, Xiuliang;Qiu, Li-juan;Che, Yingpu;Zhao, Chaosen;Wang, Ruizhen;Wang, Qiang;Qiu, Hongmei;Huang, Wen;Yang, Chunyan;Zhao, Qingsong;Liu, Like;Wang, Xing;Xing, Guangnan;Hu, Guoyu;Shan, Zhihui
关键词:Soybean growth stages; Multi-environment trials; Photothermal accumulation area; Spatial heterogeneity; Unmanned aircraft vehicle