Microcystin-LR-regulated transcriptome dynamics in ZFL cells
文献类型: 外文期刊
第一作者: Lu, Xing
作者: Lu, Xing;Tian, Juan;Wen, Hua;Jiang, Ming;Liu, Wei;Wu, Fan;Yu, Lijuan;Zhong, Shan;Zhong, Shan;Zhong, Shan
作者机构:
关键词: Microcystin; ZFL cell line; Transcriptome; Gene transcription; Signaling pathway
期刊名称:AQUATIC TOXICOLOGY ( 影响因子:4.964; 五年影响因子:5.071 )
ISSN: 0166-445X
年卷期: 2019 年 212 卷
页码:
收录情况: SCI
摘要: Microcystin-LR (MC-LR) is a highly toxic hepatotoxin that poses great hazards to aquatic organisms and even human health. The zebrafish liver cell line (ZFL) is a valuable model for investigating toxicity and metabolism of toxicants. However, the toxicity of MC-LR and its effects on gene transcription of ZFL cells remains to be characterized. In this study, we determined the toxicity of MC-LR for ZFL cells and investigated the effects of MC-LR on cellular transcriptome dynamics. The EC50 of MC-LR for ZFL cells was 80.123 mu g/mL. The ZFL cells were exposed to 10 mu g/mL MC-LR for 0, 1, 3, 6, 12 or 24 h, and RNA-sequencing was performed to analyze gene transcription. A total of 10,209 genes were found to be regulated by MC-LR. The numbers of up- and down-regulated genes at different time points ranged from 2179 to 3202 and from 1501 to 2597, respectively. Furthermore, 1543 genes underwent differential splicing (AS) upon MC-LR exposure, of which 620 were not identified as differentially expressed gene (DEG). The effects of MC-LR on cellular functions were highly time-dependent. MAPK (mitogen-activated protein kinase) and FoxO (forkhead box O) signaling pathways were the most prominent pathways activated by MC-LR. Steroid biosynthesis and terpenoid backbone biosynthesis were the most enriched for the down-regulated genes. A gene regulatory network was constructed from the expression profile datasets and the candidate master transcription factors were identified. Our results shed light on the molecular mechanisms of MC-LR cellular toxicity and the transcriptome landscapes of ZFL cells upon MC-LR toxicity.
分类号:
- 相关文献
作者其他论文 更多>>
-
D-Limonene Is the Active Olfactory Attractant in Orange Juice for Bactrocera dorsalis (Insecta: Diptera: Tephritidae)
作者:Liu, Leyuan;Zhou, Hongxu;Yuan, Jinxi;Liu, Wei;Wang, Guirong;Yang, Lang;Zhang, Jie;Liu, Chenhao
关键词:B. dorsalis; behavior regulation technology; D-Limonene; odor receptor
-
Integrative analysis of metabolome and transcriptome reveals regulatory mechanisms of flavonoid biosynthesis in soybean under salt stress
作者:Wang, Yubin;Liu, Wei;Li, Wei;Wang, Caijie;Dai, Haiying;Xu, Ran;Zhang, Yanwei;Zhang, Lifeng;Wang, Yubin;Liu, Wei;Li, Wei;Wang, Caijie;Dai, Haiying;Xu, Ran;Zhang, Yanwei;Zhang, Lifeng
关键词:soybean; salt stress; metabolome; transcriptome; flavonoid; regulatory mechanism
-
1-MCP combined with laser microporous film packaging maintains the quality and prolongs the storage period of Xiahei grapes
作者:Tong, Xiuzi;Chen, Yanan;Shi, Nan;Kong, Xiaoxue;Luo, Haibo;Tong, Xiuzi;Shi, Pingping;Yu, Lijuan;Song, Huibo
关键词:Grape; rachis browning; shelf life; softening; spontaneous modified atmosphere packaging
-
A vesicular stomatitis virus-based African swine fever vaccine prototype effectively induced robust immune responses in mice following a single-dose immunization
作者:Ma, Yunyun;Shao, Junjun;Liu, Wei;Gao, Shandian;Peng, Decai;Miao, Chun;Yang, Sicheng;Hou, Zhuo;Zhou, Guangqing;Chang, Huiyun;Qi, Xuefeng
关键词:African swine fever virus; vaccine prototypes; vesicular stomatitis virus; safety; immune potency
-
Effects of dietary microbial protease on growth performance, nutrient apparent digestibility, hepatic antioxidant capacity, protease activities and intestinal microflora in juvenile genetically improved farmed tilapia, Oreochromis niloticus
作者:Wu, Jianjun;Wang, Qijun;Zhang, Chengjie;Fu, Dabo;Xu, Li;Zhou, Ying;Yu, Ting;Liu, Wei;Jiang, Ming;Wu, Jinping;Wu, Jinping
关键词:Different proteases; Growth performance; Apparent digestibility; Protease activities; Intestine microbiota
-
Effects of the Species and Growth Stage on the Antioxidant and Antifungal Capacities, Polyphenol Contents, and Volatile Profiles of Bamboo Leaves
作者:Shen, Hui;Wang, Yan;Shi, Pingping;Li, Hong;Yang, Fang;Yu, Lijuan;Li, Hong;Chen, Yanan;Luo, Haibo;Hu, Tenggen;Yu, Yuanshan;Wang, Jinxiang
关键词:antifungal capacity; antioxidant capacity; bamboo leaf; genotype; volatile profile
-
Inhibition of cinnamic acid and its derivatives on polyphenol oxidase: Effect of inhibitor carboxyl group and system pH
作者:Jiang, Hongwei;Zhou, Lei;Wang, Yue;Peng, Shengfeng;Yu, Wenzhi;Tian, Yuqing;Liu, Junping;Liu, Wei;Liu, Guangxian;Liu, Wei
关键词:Polyphenol oxidase; Cinnamic acid; Inhibition; Carboxyl groups; pH