Molecular characterization of HLJ-073, a recombinant canine coronavirus strain from China with an ORF3abc deletion
文献类型: 外文期刊
第一作者: Chen, Si
作者: Chen, Si;Liu, Dafei;Tian, Jin;Kang, Hongtao;Guo, Dongchun;Jiang, Qian;Liu, Jiasen;Li, Zhijie;Hu, Xiaoliang;Qu, Liandong
作者机构:
关键词: Canine coronavirus; ORF3abc; Recombination; Pantropic; Viral cell tropism
期刊名称:ARCHIVES OF VIROLOGY ( 影响因子:2.574; 五年影响因子:2.466 )
ISSN: 0304-8608
年卷期: 2019 年 164 卷 8 期
页码:
收录情况: SCI
摘要: Canine enteric coronaviruses (CCoVs) are important enteric pathogens of dogs. CCoVs with different variations are typically pantropic and pathogenic in dogs. In this study, we isolated a CCoV, designated HLJ-073, from a dead 6-week-old male Pekingese with gross lesions and diarrhea. Interestingly, sequence analysis suggested that HLJ-073 contained a 350-nt deletion in ORF3abc compared with reference CCoV isolates, resulting in the loss of portions of ORF3a and ORF3c and the complete loss of ORF3b. Phylogenetic analysis based on the S gene showed that HLJ-073 was more closely related to members of the FCoV II cluster than to members of the CCoV I or CCoV II cluster. Furthermore, recombination analysis suggested that HLJ-073 originated from the recombination of FCoV 79-1683 and CCoV A76, which were both isolated in the United States. Cell tropism experiments suggested that HLJ-073 could effectively replicate in canine macrophages/monocytes and human THP-1 cells. This is the first report of the isolation of strain HLJ-073 in China, and this virus has biological characteristics that are different from those of other reported CCoVs.
分类号:
- 相关文献
作者其他论文 更多>>
-
Endogenous cell wall degrading enzyme LytD is important for the biocontrol activity of Bacillus subtilis
作者:Wang, Luotao;Chen, Si;Su, Xin;Wang, Zhenshuo;Zeng, Qingchao;Wang, Qi;Li, Yan;Huang, Jianquan;Zhang, Xun;Wang, Lujun;Zhang, Wei
关键词:autolysin; peptidoglycan; cell wall degrading enzyme; colonization; biofilm; induced resistance; biological control
-
High-density genetic map construction and QTL mapping of a zigzag-shaped stem trait in tea plant (Camellia sinensis)
作者:Liu, Dingding;Ye, Yuanyuan;Tang, Rongjin;Gong, Yang;Chen, Si;Zhang, Chenyu;Mei, Piao;Chen, Jiedan;Chen, Liang;Ma, Chunlei
关键词:Tea plant; Zigzag-shaped stem trait; Genetic map; QTL; Candidate genes
-
Integrating GWAS, RNA-Seq and functional analysis revealed that BnaA02.SE mediates silique elongation by affecting cell proliferation and expansion in Brassica napus
作者:Zhang, Liyuan;Li, Xiaodong;Chen, Si;Xiang, Sirou;Sun, Tingting;Yang, Ziyan;Kong, Xizeng;Qu, Cunmin;Li, Jiana;Yang, Bo;Zhang, Chao;Lu, Kun
关键词:Brassica napus; silique elongation; GWAS; transcriptome analysis; BnaA02.SE; functional research
-
Spatiotemporal analysis of microstructure, sensory attributes, and full-spectrum metabolomes reveals the relationship between bitterness and nootkatone in Alpinia oxyphylla miquel fruit peel and seeds
作者:Chen, Xiaolu;Wang, Maoyuan;Tian, Qin;Jiang, Qian;Hu, Xuan;Ye, Weiguo;Shen, Wanyun;Luo, Xueting;Chen, Xueyan;Yuan, Chao;Wang, Dan;Wu, Tianrong;Li, Yulan;Fu, Wenna;Guan, Lingliang;Li, Xingfei;Wang, Zhunian;Yan, Xiaoxia;Yu, Fulai;Yang, Yong;Pan, Yonggui;Tian, Qin;Shen, Wanyun;Chen, Xueyan;Luo, Xueting;Wu, Tianrong;Fu, Wenna;Zhang, Lingyan
关键词:Zingiberaceae; Aroma; Taste; Flavor; Bitter; Chemical composition; Nootkatone; Homologous medicinal food; Functional food; Pigment layer; Oil cell; Essential oil
-
Progress in Research and Prospects for Application of Precision Gene-Editing Technology Based on CRISPR-Cas9 in the Genetic Improvement of Sheep and Goats
作者:Lu, Zeyu;Mu, Qing;Liu, Junyang;Chen, Yu;Wang, Haoyuan;Zhang, Yanjun;Su, Rui;Wang, Ruijun;Wang, Zhiying;Lv, Qi;Liu, Zhihong;Zhao, Yanhong;Lu, Zeyu;Mu, Qing;Liu, Junyang;Chen, Yu;Wang, Haoyuan;Zhang, Yanjun;Su, Rui;Wang, Ruijun;Wang, Zhiying;Lv, Qi;Liu, Zhihong;Zhao, Yanhong;Lu, Zeyu;Mu, Qing;Liu, Junyang;Chen, Yu;Wang, Haoyuan;Zhang, Yanjun;Su, Rui;Wang, Ruijun;Wang, Zhiying;Lv, Qi;Liu, Zhihong;Zhao, Yanhong;Zhang, Lingtian;Liu, Jiasen;Li, Yunhua
关键词:precision gene editing; CRISPR-Cas9; livestock genetic breeding; cashmere goat; editing efficiency; fixed point integration
-
One-third substitution of nitrogen with cow manure or biochar greatly reduced N2O emission and carbon footprint in saline-alkali soils
作者:Zhang, Sheng;Zhang, Sheng;Feng, Ying;Zhang, Sheng;Feng, Ying;Xue, Lihua;Liu, Ji;Xu, Yi;Li, Zhijie;Jia, Pingping;Zhao, Xiaoning
关键词:N fertilizer substitution; Manure; Biochar; Net ecosystem carbon budget; Carbon footprint
-
Comprehensive high-throughput sequencing, evolutionary and functional analyses reveal the conservation and diversification of miR166s in regulating pleiotropic traits between rapeseed and Arabidopsis
作者:Zhang, Liyuan;Chen, Si;Yang, Ziyan;Xu, Jinxiong;Sun, Tingting;Kong, Xizeng;Qu, Cunmin;Li, Jiana;Zhang, Liyuan;Lu, Kun;Zhang, Chao;Yang, Bo;Kang, Lin
关键词:High -throughput sequencing; Pleiotropic traits; MiR166/HD-Zip III; Functional research; Rapeseed and Arabidopsis