Identification of Potential Novel B-Cell Epitopes of Capsid Protein VP2 in Senecavirus A
文献类型: 外文期刊
第一作者: Ru, Yi
作者: Ru, Yi;Hao, Rongzeng;Wu, Chunping;Li, Yajun;Lu, Bingzhou;Liu, Huanan;Tian, Hong;Li, Dan;Shi, Zhengwang;Luo, Juncong;Ma, Kun;Zhang, Guicai;Liu, Xiangtao;Zheng, Haixue
作者机构:
关键词: senecavirus A; SVA; VP2 protein; immunodominant epitope; Pepscan
期刊名称:MICROBIOLOGY SPECTRUM ( 影响因子:3.7; 五年影响因子:5.9 )
ISSN: 2165-0497
年卷期: 2023 年
页码:
收录情况: SCI
摘要: The clinical symptoms and lesions caused by SVA are indistinguishable from those of other vesicular diseases in pigs. SVA has been associated with recent outbreaks of vesicular disease and epidemic transient neonatal losses in several swine-producing countries. Senecavirus A (SVA) is a type of nonenveloped single-stranded, positive-sense RNA virus. The VP2 protein is a structural protein that plays an important role in inducing early and late immune responses of the host. However, its antigenic epitopes have not been fully elucidated. Therefore, defining the B epitopes of the VP2 protein is of great importance to revealing its antigenic characterization. In this study, we analyzed B-cell immunodominant epitopes (IDEs) of the VP2 protein from the SVA strain CH/FJ/2017 using the Pepscan approach and a bioinformatics-based computational prediction method. The following four novel IDEs of VP2 were identified: IDE1, (41)TKSDPPSSSTDQPTTT(56); IDE2, (145)PDGKAKSLQELNEEQW(160); IDE3, (161)VEMSDDYRTGKNMPF(175); and IDE4, (267)PYFNGLRNRFTTGT(280). Most of the IDEs were highly conserved among the different strains. To our knowledge, the VP2 protein is a major protective antigen of SVA that can induce neutralizing antibodies in animals. Here, we analyzed the immunogenicity and neutralization activity of four IDEs of VP2. Consequently, all four IDEs showed good immunogenicity that could elicit specific antibodies in guinea pigs. A neutralization test in vitro showed that the peptide-specific guinea pig antisera of IDE2 could neutralize SVA strain CH/FJ/2017, and IDE2 was identified as a novel potential neutralizing linear epitope. This is the first time VP2 IDEs have been identified by using the Pepscan method and a bioinformatics-based computational prediction method. These results will help elucidate the antigenic epitopes of VP2 and clarify the basis for immune responses against SVA.IMPORTANCE The clinical symptoms and lesions caused by SVA are indistinguishable from those of other vesicular diseases in pigs. SVA has been associated with recent outbreaks of vesicular disease and epidemic transient neonatal losses in several swine-producing countries. Due to the continuing spread of SVA and the lack of commercial vaccines, the development of improved control strategies is urgently needed. The VP2 protein is a crucial antigen on the capsids of SVA particles. Furthermore, the latest research showed that VP2 could be a promising candidate for the development of novel vaccines and diagnostic tools. Hence, a detailed exploration of epitopes in the VP2 protein is necessary. In this study, four novel B-cell IDEs were identified using two different antisera with two different methods. IDE2 was identified as a new neutralizing linear epitope. Our findings will help in the rational design of epitope vaccines and further understanding of the antigenic structure of VP2.
分类号:
- 相关文献
作者其他论文 更多>>
-
ASFV infection induces macrophage necroptosis and releases proinflammatory cytokine by ZBP1-RIPK3-MLKL necrosome activation
作者:Zhang, Dajun;Hao, Yu;Yang, Xing;Shi, Xijuan;Zhao, Dengshuai;Chen, Lingling;Liu, Huanan;Zhu, Zixiang;Zheng, Haixue
关键词:ASFV; host macrophages; necroptosis signaling; ZBP1; Z-DNA; proinflammatory cytokines
-
African Swine Fever Virus I267L Is a Hemorrhage-Related Gene Based on Transcriptome Analysis
作者:Wen, Yuan;Duan, Xianghan;Ren, Jingjing;Zhang, Jing;Guan, Guiquan;Ru, Yi;Li, Dan;Zheng, Haixue;Wen, Yuan;Duan, Xianghan;Ren, Jingjing;Zhang, Jing;Guan, Guiquan;Ru, Yi;Li, Dan;Zheng, Haixue
关键词:African swine fever virus; I267L; hemorrhage; F3; tissue factor
-
The Prediction of Clinical Mastitis in Dairy Cows Based on Milk Yield, Rumination Time, and Milk Electrical Conductivity Using Machine Learning Algorithms
作者:Tian, Hong;Zhou, Xiaojing;Zhou, Xiaojing;Zhao, Zixuan;Wang, Hao;Xu, Chuang;Deng, Zhaoju;Xu, Wei
关键词:cow; mastitis; prediction; rumination; electrical conductivity of milk; machine learning
-
Single- cell profiling of African swine fever virus disease in the pig spleen reveals viral and host dynamics
作者:Zhu, Zixiang;Mao, Ruoqing;Liu, Baohong;Liu, Huanan;Shi, Zhengwang;Zhang, Kunpeng;Liu, Huisheng;Zhang, Danyang;Liu, Jia;Zhao, Zhenxiang;Li, Kangli;Yang, Fan;Cao, Weijun;Zhang, Xiangle;Shen, Chaochao;Sun, Dehui;Tian, Hong;Ru, Yi;Feng, Tao;He, Jijun;Guo, Jianhong;Zhang, Keshan;Zhang, Shilei;Zheng, Haixue;Mao, Ruoqing;Liu, Huanan;He, Jijun;Guo, Jianhong;Zheng, Haixue;Liu, Huanan;Shi, Zhengwang;Zhang, Xiangle;Shen, Chaochao;He, Jijun;Guo, Jianhong;Zheng, Haixue;Wang, Liyuan;Tang, Zhonglin;Ding, Chan;Han, Jun
关键词:African swine fever virus; single- cell RNA sequencing; host antiviral response; monocytes; cellular tropism
-
Picornavirus VP3 protein induces autophagy through the TP53-BAD-BAX axis to promote viral replication
作者:Mao, Ruoqing;Zhu, Zixiang;Yang, Fan;Sun, Dehui;Zhou, Xiaoli;Cao, Weijun;Qin, Xiaodong;Dang, Wen;Liu, Huanan;Tian, Hong;Zhang, Keshan;Liu, Xiangtao;Zheng, Haixue;Wu, Qingfeng
关键词:Autophagy; picornavirus; replication; TP53-BAD-BAX axis; VP3
-
Biological Characteristics, Domesticated Cultivation Protocol, Antioxidant Activity, and Protective Effects against Cellular Oxidative Stress of an Underutilized Medicinal Mushroom: Fomitopsis palustris
作者:Liang, Yi;Dai, Dan;Chang, Wan-Qiu;Wang, Yang;Zhang, Zhen-Hao;Li, Dan;Zhang, Bo;Li, Yu;Dai, Dan;Wang, Yang
关键词:Fomitopsis palustris; brown-rot fungus; medicinal mushroom; orthogonal test; crude polysaccharide; antioxidant activity; RAW264.7cell
-
KIF5B-mediated internalization of FMDV promotes virus infection
作者:Zhang, Wei;Yang, Fan;Yang, Yang;Cao, Weijun;Shao, Wenhua;Wang, Jiali;Huang, Mengyao;Chen, Zhitong;Zhao, Xiaoyi;Li, Weiwei;Zhu, Zixiang;Zheng, Haixue;Zhang, Wei;Yang, Fan;Yang, Yang;Cao, Weijun;Shao, Wenhua;Wang, Jiali;Huang, Mengyao;Chen, Zhitong;Zhao, Xiaoyi;Li, Weiwei;Zhu, Zixiang;Zheng, Haixue
关键词:FMDV; VP1 protein; KIF5B; Endosome; Clathrin