Genome-wide characterization of trichome birefringence-like genes provides insights into fiber yield improvement
文献类型: 外文期刊
第一作者: Li, Ziyin
作者: Li, Ziyin;Xiao, Xianghui;Song, Jikun;Gong, Juwu;Chen, Quanjia;Yuan, Youlu;Li, Ziyin;Li, Pengtao;Zhang, Haibo;Peng, Renhai;Lu, Quanwei;Li, Ziyin;Shi, Yuzhen;Xiao, Xianghui;Song, Jikun;Li, Pengtao;Gong, Juwu;Gong, Wankui;Liu, Aiying;Shang, Haihong;Ge, Qun;Li, Junwen;Pan, Jingtao;Lu, Quanwei;Yuan, Youlu
作者机构:
关键词: cotton; TBL; expression pattern; lint percentage; WGCNA
期刊名称:FRONTIERS IN PLANT SCIENCE ( 影响因子:5.6; 五年影响因子:6.8 )
ISSN: 1664-462X
年卷期: 2023 年 14 卷
页码:
收录情况: SCI
摘要: Cotton is an important fiber crop. The cotton fiber is an extremely long trichome that develops from the epidermis of an ovule. The trichome is a general and multi-function plant organ, and trichome birefringence-like (TBL) genes are related to trichome development. At the genome-wide scale, we identified TBLs in four cotton species, comprising two cultivated tetraploids (Gossypium hirsutum and G. barbadense) and two ancestral diploids (G. arboreum and G. raimondii). Phylogenetic analysis showed that the TBL genes clustered into six groups. We focused on GH_D02G1759 in group IV because it was located in a lint percentage-related quantitative trait locus. In addition, we used transcriptome profiling to characterize the role of TBLs in group IV in fiber development. The overexpression of GH_D02G1759 in Arabidopsis thaliana resulted in more trichomes on the stems, thereby confirming its function in fiber development. Moreover, the potential interaction network was constructed based on the co-expression network, and it was found that GH_D02G1759 may interact with several genes to regulate fiber development. These findings expand our knowledge of TBL family members and provide new insights for cotton molecular breeding.
分类号:
- 相关文献
作者其他论文 更多>>
-
Genome-wide analysis of HACD family genes and functional characterization of GhHACD2 for very long chain fatty acids biosynthesis in Gossypium hirsutum
作者:Yan, Minwen;Xi, Hongyuan;Hu, Shoulin;Hu, Shiyin;Song, Jikun;Jia, Bing;Feng, Pan;Yang, Liupeng;Ma, Jianjiang;Wang, Li;Pei, Wenfeng;Zhang, Bingbing;Yu, Jiwen;Wu, Man
关键词:VLCFA; 3-hydroxyacyl-CoA dehydratase; phylogenetic analysis; co-expression; pathway; qRT-PCR
-
Fine mapping of the fiber length-related qFL-A12-2 QTL through the use of chromosome segment substitution lines and candidate gene validation
作者:Xiao, Xianghui;Liu, Ruixian;Gong, Juwu;Li, Pengtao;Zhang, Haibo;Chen, Yu;Sun, Zhihao;Peng, Renhai;Lu, Quanwei;Gong, Juwu;Gong, Wankui;Liu, Aiying;Ge, Qun;Liu, Yangming;Shang, Haihong;Li, Junwen;Yan, Haoliang;Pan, Jingtao;Shi, Yuzhen;Yuan, Youlu;Gong, Juwu;Yang, Rui;Wang, Yongbo;Gong, Juwu
关键词:Single segment introgression line; Fiber length; BSA; Fine mapping; GhALMT12_A12
-
Widespread incomplete lineage sorting and introgression shaped adaptive radiation in the Gossypium genus
作者:Xu, Yanchao;Zhou, Zhongli;Cai, Xiaoyan;Umer, Muhammad Jawad;Hou, Yuqing;Wang, Yuhong;Wang, Kunbo;Yu, Shuxun;Liu, Fang;Xu, Yanchao;Wei, Yangyang;Liu, Yuling;Peng, Renhai;Xu, Yanchao;Cai, Xiaoyan;Boden, Scott A.;Safdar, Luqman B.;Jin, Dingsha;Wall, Sarah Brooke;Zhang, Baohong;Liu, Fang
关键词:cotton speciation; Gossypium genus; incomplete lineage sorting; ILS; phylogenetic analysis; gene tree resolution
-
Maize straw increases while its biochar decreases native organic carbon mineralization in a subtropical forest soil
作者:Zhou, Jiashu;Zhang, Shaobo;Lv, Junyan;Zhang, Haibo;Cai, Yanjiang;Yu, Bing;Li, Yongfu;Zhang, Shaobo;Tang, Caixian;Fang, Yunying;Tavakkoli, Ehsan;Ge, Tida;Luo, Yu;White, Jason C.
关键词:Biochar; C-cycling genes; Priming effect; Soil organic C mineralization; Straw
-
Combined genome and transcriptome analysis of elite fiber quality in Gossypium barbadense
作者:Song, Xiaohui;Zhu, Guozhong;Su, Xiujuan;Yu, Yujia;Duan, Yujia;Wang, Haitang;Shang, Xiaoguang;Guo, Wangzhen;Song, Xiaohui;Zhu, Guozhong;Su, Xiujuan;Yu, Yujia;Duan, Yujia;Wang, Haitang;Shang, Xiaoguang;Guo, Wangzhen;Su, Xiujuan;Chen, Quanjia;Xu, Haijiang
关键词:
-
Genome-Wide and Expression Pattern Analysis of the HIT4 Gene Family Uncovers the Involvement of GHHIT4_4 in Response to Verticillium Wilt in Gossypium hirsutum
作者:Zhang, Guoli;Wang, Zhijun;Zhu, Jincheng;Zhang, Guoli;Jiao, Yang;Chen, Quanjia;Zhang, Guoli;Jiao, Yang;Zhao, Zengqiang;Wang, Zhijun;Zhu, Jincheng;Jiao, Yang;Zhao, Zengqiang;Lv, Ning;Sun, Guoqing
关键词:G. hirsutum; HIT4; Verticillium wilt; phylogenetic analysis; multiple synteny; expression pattern; WGCNA; VIGS; transgenic tobacco
-
Functional Analysis of the GhIQD1 Gene in Cotton Resistance to Verticillium Wilt
作者:Xu, Jianglin;Wang, Yongqiang;Chen, Quanjia;Zheng, Kai;Xu, Jianglin;Zhou, Ting;Wang, Yongqiang;Yang, Yejun;Sun, Guoqing;Zhou, Ting;Yang, Yejun;Pu, Yuanchun
关键词:cotton; chlorosis; plant hormones; calmodulin-binding protein