In vivo dynamics and regulation of DNA G-quadruplex structures in mammals
文献类型: 外文期刊
第一作者: Zhang, Ze-Hao
作者: Zhang, Ze-Hao;Qian, Sheng Hu;Chen, Zhen-Xia;Wei, Dengguo;Chen, Zhen-Xia;Chen, Zhen-Xia
作者机构:
关键词: G-quadruplex; Identification and characterization; Dynamic regulation; Therapeutic applications
期刊名称:CELL AND BIOSCIENCE ( 影响因子:7.5; 五年影响因子:7.9 )
ISSN:
年卷期: 2023 年 13 卷 1 期
页码:
收录情况: SCI
摘要: G-quadruplex (G4) is a four-stranded helical DNA secondary structure formed by guanine-rich sequence folding, and G4 has been computationally predicted to exist in a wide range of species. Substantial evidence has supported the formation of endogenous G4 (eG4) in living cells and revealed its regulatory dynamics and critical roles in several important biological processes, making eG4 a regulator of gene expression perturbation and a promising therapeutic target in disease biology. Here, we reviewed the methods for prediction of potential G4 sequences (PQS) and detection of eG4s. We also highlighted the factors affecting the dynamics of eG4s and the effects of eG4 dynamics. Finally, we discussed the future applications of eG4 dynamics in disease therapy.
分类号:
- 相关文献
作者其他论文 更多>>
-
Integrating massive RNA-seq data to elucidate transcriptome dynamics in Drosophila melanogaster
作者:Chen, Zhen-Xia;Qian, Sheng Hu;Shi, Meng-Wei;Wang, Dan-Yang;Chen, Lu;Tu, Yi-Xuan;Liu, Hong-Shan;Zhang, Yuan;Zhang, Shuai-Jie;Yu, Shan-Shan;Qian, Sheng Hu;Shi, Meng-Wei;Wang, Dan-Yang;Chen, Lu;Tu, Yi-Xuan;Liu, Hong-Shan;Zhang, Yuan;Zhang, Shuai-Jie;Yu, Shan-Shan;Fear, Justin M.;Oliver, Brian;Chen, Zhen-Xia;Chen, Zhen-Xia;Chen, Zhen-Xia
关键词:sequence read archive; gene expression dynamics; computational methods; data integration and quality control; massively parallel sequencing
-
G-quadruplex in the TMV Genome Regulates Viral Proliferation and Acts as Antiviral Target of Photodynamic Therapy
作者:Xie, Congbao;Zhang, Xianpeng;Sun, Ju;Shang, Hongqi;Wang, Daozhong;Wei, Dengguo;Xie, Congbao;Zhang, Xianpeng;Pei, Wenyue;Sun, Ju;Shang, Hongqi;Wang, Daozhong;Li, Feng;Wei, Dengguo;Xie, Congbao;Sun, Ju;Wang, Daozhong;Wei, Dengguo;Xie, Congbao;Sun, Ju;Wang, Daozhong;Wei, Dengguo;Xie, Congbao;Sun, Ju;Wang, Daozhong;Wei, Dengguo;Xie, Congbao;Sun, Ju;Wang, Daozhong;Wei, Dengguo;Zhang, Xianpeng;Wang, Mengxi;Pei, Wenyue;Li, Feng;Huang, Zhiyuan;Wang, Guiqian;Gui, Zhikun;Liu, Sisi
关键词:
-
EndoQuad: a comprehensive genome-wide experimentally validated endogenous G-quadruplex database
作者:Qian, Sheng Hu;Shi, Meng-Wei;Xiong, Yu-Li;Zhang, Yuan;Zhang, Ze-Hao;Song, Xue-Mei;Deng, Xin-Yin;Chen, Zhen-Xia;Chen, Zhen-Xia;Chen, Zhen-Xia
关键词:
-
Unfolding of an RNA G-quadruplex motif in the negative strand genome of porcine reproductive and respiratory syndrome virus by host and viral helicases to promote viral replication
作者:Fang, Puxian;Xie, Congbao;Pan, Ting;Cheng, Ting;Chen, Wei;Xia, Sijin;Ding, Tong;Fang, Junkang;Zhou, Yanrong;Fang, Liurong;Wei, Dengguo;Xiao, Shaobo;Fang, Puxian;Pan, Ting;Cheng, Ting;Chen, Wei;Xia, Sijin;Ding, Tong;Zhou, Yanrong;Fang, Liurong;Xiao, Shaobo;Xie, Congbao;Fang, Junkang;Wei, Dengguo;Xie, Congbao;Fang, Junkang;Wei, Dengguo;Xie, Congbao;Fang, Junkang;Wei, Dengguo;Xie, Congbao;Fang, Junkang;Wei, Dengguo
关键词:
-
PDA-PRGCN: identification of Piwi-interacting RNA-disease associations through subgraph projection and residual scaling-based feature augmentation
作者:Zhang, Ping;Sun, Weicheng;Wei, Dengguo;Li, Guodong;Xu, Jinsheng;Li, Li;Wei, Dengguo;Wei, Dengguo;Li, Li;You, Zhuhong;Zhao, Bowei
关键词:Piwi-interacting RNA; Disease; Subgraph projection; Feature augmentation; Graph convolutional network; piRNA-disease associations
-
Male-Biased Gut Microbiome and Metabolites Aggravate Colorectal Cancer Development
作者:Wang, Ling;Tu, Yi-Xuan;Chen, Lu;Zhang, Yuan;Pan, Xue-Ling;Yang, Shu-Qiao;Zhang, Shuai-Jie;Li, Sheng-Hui;Yu, Ke-Chun;Song, Shuo;Zhang, Shuai;Yao, Fan;Chen, Zhen-Xia;Wang, Ling;Tu, Yi-Xuan;Chen, Lu;Zhang, Yuan;Pan, Xue-Ling;Yang, Shu-Qiao;Zhang, Shuai-Jie;Li, Sheng-Hui;Yu, Ke-Chun;Song, Shuo;Guo, Min;Yao, Fan;Chen, Zhen-Xia;Wang, Ling;Zhang, Shuai;Yao, Fan;Chen, Zhen-Xia;Xu, Hong-Li;Yin, Zhu-Cheng;Yue, Jun-Qiu;Liang, Xin-Jun;Ni, Qian-Lin;Tang, Tang;Zhang, Jiu-Liang;Chen, Zhen-Xia;Chen, Zhen-Xia
关键词:colorectal cancer; fecal microbiota transplantation; gut microbiome; sexual dimorphism
-
An overview of single-molecule techniques and applications in the study of nucleic acid structure and function
作者:Fang, Junkang;Xie, Congbao;Tao, Yanfei;Wei, Dengguo;Fang, Junkang;Xie, Congbao;Tao, Yanfei;Wei, Dengguo;Fang, Junkang;Xie, Congbao;Tao, Yanfei;Wei, Dengguo;Fang, Junkang;Xie, Congbao;Tao, Yanfei;Wei, Dengguo;Fang, Junkang;Xie, Congbao;Tao, Yanfei;Wei, Dengguo;Fang, Junkang;Xie, Congbao;Tao, Yanfei;Wei, Dengguo;Tao, Yanfei;Wei, Dengguo
关键词:Single-molecule technology; Nucleic acid structure; Conformational distribution; Structural transformation; Interaction between proteins and nucleic; acid structures; Interaction between small molecules and; nucleic acid structures