Research on the Origin Traceability of Honeysuckle Based on Improved 1D-VD-CNN and Near-Infrared Spectral Data
文献类型: 外文期刊
第一作者: Chen Dong-ying
作者: Chen Dong-ying;Zhang Hao;Zhang Zi-long;Yu Mu-xin;Chen Dong-ying;Zhang Hao;Chen Lu
作者机构:
关键词: Honeysuckle; Near-infrared spectroscopy; Very-deep (VD); One-dimensional convolutional neural network ( 1D-CNN); Origin traceability
期刊名称:SPECTROSCOPY AND SPECTRAL ANALYSIS ( 影响因子:0.7; 五年影响因子:0.6 )
ISSN: 1000-0593
年卷期: 2023 年 43 卷 5 期
页码:
收录情况: SCI
摘要: Honeysuckle is an essential medicine for clearing away heat and detoxifying. However, the sources of honeysuckle on the market are complicated, and the most famous honeysuckle produced in Pingyi, Shandong, is often counterfeited. Most existing identification methods are time-consuming, costly, and complex to operate. Therefore, a fast and efficient way to trace the honeysuckles origin is urgently needed. The current one-dimensional convolutional neural network (1D-CNN) identification model based on honeysuckle near-infrared spectroscopy (NIRS) data has the problems of too many parameters and too low model efficiency, high computational complexity and is prone to overfitting. This paper improves the traditional 1D-CNN structure. We use the more efficient VD (Very Deep) structure to replace the hidden layer structure in the conventional 1D-CNN and make adaptive improvements for NIRS data so that the model can be directly applied to one-dimensional NIRS data. The improvement method is divided into three steps: firstly, the design of the feature layer is converted into two constraints optimization design: the first constraint is to set the C value of each convolution layer (the ratio of the size of the convolution kernel and the receptive field) to 1/6, which can improve the efficiency of the network model; the second constraint is to take the size of the top-level sensory domain as the size of the data vector, which can achieve feature extraction of deeper data and reduce overfitting. Secondly, this design minimizes the output feature vector of the feature layer to a smaller size through the downsampling operation. Finally, use two convolutional layers of size 1x5 and a pooling layer with dropout to downsample the data size to a vector of only one vector instead of a fully connected layer for classification, thereby reducing the number of parameters. In the experiment, 500 honeysuckles samples were collected from the main producing areas of Henan, Shandong, Hebei, and Chongqing. The spectral range used in the test is 908 similar to 1 676 nm. The sample set was preprocessed by the KS algorithm, and the training set, validation set and test set were divided by the shuffle algorithm. At last, a honeysuckle origin identification model based on improved 1D-VD-CNN and near-infrared spectroscopy was constructed. The results show that the 1D-VD-CNN training set and test sets accuracy reach 100%, and the loss value converges around 0.001. Compared with the traditional 1D-CNN model, the training set and test set accuracy of the 1D-VD-CNN model are improved by about 0.5% and 1.4%, respectively, and the number of parameters and FLOPs are reduced by nearly 1 M and 20 M, respectively. At the same time, compared with the original spectral data analysis method and the PLS-DA method, it shows that the 1D-VD-CNN model has higher efficiency and better recognition performance for honeysuckle near-infrared spectral classification.
分类号:
- 相关文献
作者其他论文 更多>>
-
Incorporating genomic annotation into single-step genomic prediction with imputed whole-genome sequence data
作者:Teng Jin-yan;Ye Shoo-pan;Chen Zi-tao;Diao Shu-qi;Yuan Xiao-long;Zhang Hao;Li Jia-qi;Zhang Xi-quan;Zhang Zhe;Gao Ning;Li Xiu-jin
关键词:genomic selection; prior information; sequencing data; genotype imputation; haplotype
-
Analysis of DNA methylation of CD79B in MDV-infected chicken spleen
作者:Wang Lu-Lu;Zhao Chun-Fang;Zhang Hao;Lian Ling;Wang Lu-Lu;Zhao Chun-Fang;Zhang Hao;Lian Ling;Liu Chang-Jun
关键词:chicken; Marek's disease; Marek's disease virus; DNA methylation; gene expression
-
Identifying the complex genetic architecture of growth and fatness traits in a Duroc pig population
作者:Zhang Zhe;Chen Zi-tao;Diao Shu-qi;Ye Shao-pan;Wang Jia-ying;Gao Ning;Yuan Xiao-long;Chen Zan-mou;Zhang Hao;Li Jia-qi
关键词:pig; GWAS; growth trait; fatness trait; candidate gene
-
Development of a Microfluidics-Based Quantitative Real-Time PCR to Rapidly Identify Photobacterium damselae subsp. damselae with Different Pathogenicity by Detecting the Presence of mcp or dly Gene
作者:Zhang Zheng;Yu Yongxiang;Chen Jing;Wang Yingeng;Liao Meijie;Rong Xiaojun;Zhang Hao;Zhang Zheng;Wang Yingeng;Liao Meijie;Rong Xiaojun;Jiang Yong
关键词:mariculture; Photobacterium damselae; microfluidics; pathogenicity; rapid detection
-
Exploring the genetic features and signatures of selection in South China indigenous pigs
作者:Diao Shu-qi;Xu Zhi-ting;Ye Shao-pan;Huang Shu-wen;Teng Jin-yan;Yuan Xiao-long;Chen Zan-mou;Zhang Hao;Li Jia-qi;Zhang Zhe
关键词:pigs; population structure; effective population size; SNP
-
Genetic Mapping and Nucleotide Diversity of Two Powdery Mildew Resistance Loci in Melon (Cucumis melo)
作者:Cui Haonan;Ding Zhuo;Fan Chao;Zhu Zicheng;Zhang Hao;Gao Peng;Luan Feishi;Cui Haonan;Ding Zhuo;Fan Chao;Zhu Zicheng;Zhang Hao;Gao Peng;Luan Feishi;Fan Chao
关键词:genetics and resistance; selection pressure analysis
-
Effects of Different Preservation Methods on Physicochemical Property of Marine Pathogen Vibrio anguillarum
作者:Yu Yongxiang;Zhang Zheng;Wang Yingeng;Liao Meijie;Rong Xiaojun;Li Bin;Zhang Hao
关键词:freeze-drying; continuous passage; cryopreservation; pathogen; Vibrio anguillarum; protectant