Transcriptome analysis of fruit development of a citrus late-ripening mutant by microarray

文献类型： 外文期刊

第一作者： Zeng, Jiwu

作者： Zeng, Jiwu;Gao, Changyu;Deng, Guiming;Jiang, Bo;Yi, Ganjun;Zhong, Yun;Zhou, Birong;Liu, Kai;Zeng, Jiwu;Deng, Guiming;Jiang, Bo;Peng, Xinxiang

作者机构：

关键词： Spontaneous bud mutation;cDNA microarray;GO terms;Hierarchical tree;Flavonol biosynthetic process

期刊名称：SCIENTIA HORTICULTURAE （ 影响因子：3.463； 五年影响因子：3.672 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Mingliutianju (Citrus reticuiata Blanco cv.Mingliutianju, MP) is a novel late ripening cultivar selected from Chuntianju (Citrus reticuiata Blanco cv.Chuntianju, CP) through spontaneous bud mutation. Large-scale analysis of gene expression differences between of peels of MP and CP is studied during the course of 12 weeks and 23 weeks after flowering (WAF) using Affymetrix GeneChip (R) citrus genome array to provide new insights into the mechanisms behind this bud mutation. Altogether, 395 differentially expressed genes are identified including 132 up-regulated and 263 down-regulated genes. Singular enrichment analysis (SEA) and parametric analysis of gene set enrichment (PAGE) are performed and 7 statistically significant differentially expressed genes are selected finally for further study. Results from semiquantitative RT-PCR performed on these 7 genes show that one gene's expression situation is totally correlated with that observed with the microarray. These seven genes include three UDP-glucosyltransferase genes, two disease resistance-responsive protein-related genes, one chitinase gene and one protein kinase family protein gene, all of which are involved in 18 different biological processes according to the hierarchical tree of annotated gene ontology (GO) terms. The candidate biological process and its relation to bud mutation are discussed. Crown Copyright (C) 2011 Published by Elsevier B.V. All rights reserved.

分类号： S6

  • 相关文献

[1]Transcription profiles of boron-deficiency-responsive genes in citrus rootstock root by suppression subtractive hybridization and cDNA microarray. Zhou, Gao-Feng,Liu, Yong-Zhong,Sheng, Ou,Wei, Qing-Jiang,Yang, Cheng-Quan,Peng, Shu-Ang,Zhou, Gao-Feng,Sheng, Ou,Wei, Qing-Jiang. 2015

[2]Identification of genes differentially expressed at the onset of the ethylene climacteric in banana. Jin, Zhi-Qiang,Xu, Bi-Yu,Liu, Ju-Hua,Su, Wei,Zhang, Jian-Bin,Yang, Xiao-Liang,Jia, Cai-Hong,Li, Mei-Ying,Jin, Zhi-Qiang. 2009

[3]Construction and application of EST library from Setaria italica in response to dehydration stress. Zhang, Jinpeng,Liu, Tingsong,Fu, Junjie,Zhu, Yun,Jia, Jinping,Zheng, Jun,Zhao, Yinhe,Zhang, Ying,Wang, Guoying.

[4]Comparative transcript profiling of gene expression of fresh and frozen-thawed bull sperm. Chen, Xiaoli,Zhu, Huabin,Hao, Haisheng,Zhao, Xueming,Qin, Tong,Wang, Dong,Wang, Yonggui.

[5]Differential expression analysis of different albescent stages of 'Anji Baicha' (Camellia sinensis (L.) O. Kuntze) using cDNA microarray. Ma, Chun-Lei,Chen, Liang,Wang, Xin-Chao,Jin, Ji-Qiang,Ma, Jian-Qiang,Yao, Ming-Zhe,Wang, Zhi-Lan. 2012

[6]Differentially Expressed Genes of Soybean During Infection by Phytophthora sojae. Xu Peng-fei,Li Wen-bin,Fan Su-jie,Li Ning-hui,Wang Xin,Jiang Liang-yu,Zhang Shu-zhen,Wu Jun-jiang,Wei Lai,Xue, Allen,Chen Wei-yuan,Lv Hui-ying,Lin Shi-feng. 2012

[7]Gene expression profiles of arabidopsis under the stress of methyl viologen: a microarray analysis. Han, Hong-Juan,Peng, Ri-He,Zhu, Bo,Fu, Xiao-Yan,Zhao, Wei,Shi, Biao,Yao, Quan-Hong.

[8]Analysis of gene expression profile of Arabidopsis genes under trichloroethylene stresses with the use of a full-length cDNA microarray. Zhu, Bo,Peng, Ri-He,Xiong, Ai-Sheng,Fu, Xiao-Yan,Zhao, Wei,Tian, Yong-Sheng,Jin, Xiao-Fen,Xue, Yong,Xu, Jing,Han, Hong-Juan,Chen, Chen,Gao, Jian-Jie,Yao, Quan-Hong.

[9]Gene expression profiling of in Moniezia expansa at different developmental proglottids using cDNA microarray. Bo, Xinwen,Zhao, Wenjuan,Zhang, Hui,Kang, Lichao,Wang, Xinhua.

[10]Differentially expressed cDNAs at the early stage of banana ripening identified by suppression subtractive hybridization and cDNA microarray. Xu, Bi Yu,Su, Wei,Liu, Ju Hua,Wang, Jia Bao,Jin, Zhi Qiang.

[11]Comparative transcript profiling of gene expression between self-incompatible and self-compatible mandarins by suppression subtractive hybridization and cDNA microarray. Miao, Hongxia,Ye, Zixing,Hu, Guibing,Qin, Yonghua,Miao, Hongxia.

作者其他论文 更多>>

微信小程序