Genetic characterization of Aleutian mink disease viruses isolated in China

文献类型: 外文期刊

第一作者: Li, Yanwu

作者: Li, Yanwu;Jiang, Ping;Li, Yanwu;Jia, Yun;Huang, Juan;Du, Yijun;Zhang, Rui

作者机构:

关键词: Aleutian mink disease virus;Genomic sequence;NS1 gene;VP1 gene

期刊名称:VIRUS GENES ( 影响因子:2.332; 五年影响因子:2.0 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Aleutian mink disease virus (AMDV) is a parvovirus that causes an immune complex mediated disease in minks. To understand the genetic characterization of AMDV in China, the genomic sequences of three isolates, ADV-LN1, ADV-LN2, and ADV-LN3, from different farms in the Northern China were analyzed. The results showed that the lengths of genomic sequences of three isolates were 4,543, 4,566, and 4,566 bp, respectively. They shared only 95.5-96.3 % nucleotide identity with each other. The nucleotide and amino acid homology of genome sequence between the Chinese isolates and European or American strains (ADV-G, ADV-Utah1, and ADVSL3) were 92.4-95.0 % and 92.1-93.8 %, respectively. The amino acid substitutions randomly distributed in the genome, especially NS gene. ADV-LN1 strain had a 9-amino-acid deletion at amino acid positions 70 and 72-79 in the VP1 gene, comparing with ADV-G strain; ADV-LN2 and ADV-LN3 strains had 1-amino-acid deletion at amino acid positions 70 in the VP1. Some potential glycosylation site mutations in VP and NS genes were also observed. Phylogenetic analysis results showed that the three strains belonged to two different branches based on the complete coding sequence of VP2 gene. However, they all were in the same group together with the strains from United States based on the NS1 sequence. It indicated that Chinese AMDV isolates had genetic diversity. The origin of the ancestors of the Chinese AMDV strains might be associated with the American strains.

分类号: R37

  • 相关文献

[1]Protective immune responses in ducklings induced by a suicidal DNA vaccine of the VP1 gene of duck hepatitis virus type 1. Fu, Yuzhi,Chen, Zongyan,Li, Chuanfeng,Liu, Guangqing,Fu, Yuzhi. 2012

[2]Phylogenetic analysis of VP1 gene sequences of waterfowl parvoviruses from the Mainland of China revealed genetic diversity and recombination. Wang, Shao,Cheng, Xiao-xia,Chen, Shao-ying,Lin, Feng-qiang,Chen, Shi-long,Zhu, Xiao-li,Wang, Jin-xiang,Huang, Mei-qing,Zheng, Min,Wang, Shao,Cheng, Xiao-xia,Chen, Shao-ying,Lin, Feng-qiang,Chen, Shi-long,Zhu, Xiao-li,Wang, Jin-xiang,Huang, Mei-qing,Zheng, Min.

[3]Identification of a novel Aleutian mink disease virus B-cell epitope using a monoclonal antibody against VP2 protein. Yi, Li,Cheng, Yuening,Zhang, Miao,Cao, Zhigang,Tong, Mingwei,Cheng, Shipeng,Yan, Xijun.

[4]Generation of an infectious clone of AMDV and identification of capsid residues essential for infectivity in cell culture. Xi, Ji,Wang, Jigui,Yu, Yongle,Zhang, Xiaomei,Li, Zhaoda,Liu, Weiquan,Zhang, Yanlong,Cui, Shangjin,Cui, Shangjin.

[5]Phylogeny and evolution of the NS1 and VP1/VP2 gene sequences from porcine parvovirus. Shangjin, Cui,Cortey, Marti,Segales, Joaquim. 2009

[6]A new nanoPCR molecular assay for detection of porcine bocavirus. Wang, Xiaoling,Zhang, Jing,Kong, Miaomiao,Cui, Yuchao,Ma, Xingjie,Cui, Shangjin,Bai, Aiquan,Ai, Xia,Tang, Qinghai. 2014

[7]A sensitive and specific nanoparticle-assisted PCR assay for rapid detection of porcine parvovirus. Cui, Y.,Wang, Z.,Ma, X.,Liu, J.,Cui, S.,Cui, Y.,Cui, S.. 2014

[8]Molecular epidemiology of Aleutian mink disease virus in China. Wang, Zhenjun,Wu, Wei,Hu, Bo,Zhang, Hailing,Bai, Xue,Zhao, Jianjun,Zhang, Lei,Yan, Xijun.

[9]A Novel Pepper (Capsicum annuum L.) WRKY Gene, CaWRKY30, Is Involved in Pathogen Stress Responses. Zheng Jingyuan,Mao Zhenchuan,Xie Bingyan,Zheng Jingyuan,Zou Xuexiao.

[10]The incidence and molecular characteristics of Apple stem grooving virus from pear in China. Hu, G. -J.,Wang, G. -P.,Wang, L. -P.,Hong, Ni.,Hu, G. -J..

[11]Validation of a loop-mediated isothermal amplification assay for visualised detection of wild-type classical swine fever virus. Zhang, Xing-Juan,Sun, Yuan,Qiu, Hua-Ji,Liu, Lihong,Belak, Sandor,Liu, Lihong,Belak, Sandor,Zhang, Xing-Juan.

[12]Purification of novel protein elicitor from Botrytis cinerea that induces disease resistance and drought tolerance in plants. Yang, Xiufen,Liu, Quan,Qju, Dewen,Zhang, Yuliang,Zeng, Hongmei,Yuan, Jingjing,Mao, Jianjun.

[13]Characterization of a Gallid herpesvirus 2 strain with novel reticuloendotheliosis virus long terminal repeat inserts. Zhang, Yan-ping,Bao, Ke-yan,Sun, Guo-rong,Lv, Hong-chao,Cui, Hong-yu,Gao, Yu-long,Wang, Xiao-mei,Liu, Chang-jun.

[14]Genomic characterisation of two virulent Newcastle disease viruses isolated from crested ibis (Nipponia nippon) in China. Hao, Huafang,Wu, Pengpeng,Wang, Jie,Duan, Xuji,Du, Enqi,Wang, Xinglong,Yang, Zengqi,Chen, Shengli.

[15]Characterization of genomic sequence of a drought-resistant gene TaSnRK2.7 in wheat species. Hong Ying Zhang,,WEI LI,XIN GUO MAO,RUI LIAN JING.

[16]Complete Genomic Sequence of the Virulent Bacteriophage RAP44 of Riemerella anatipestifer. Cheng, Long-fei,Chen, Hong-mei,Fu, Guang-hua,Shi, Shao-hua,Wan, Chun-he,Huang, Yu,Cheng, Long-fei,Chen, Hong-mei,Fu, Guang-hua,Shi, Shao-hua,Wan, Chun-he,Huang, Yu,Zheng, Teng. 2012

[17]Molecular cloning and characterization of a novel glyoxalase I gene TaGly I in wheat (Triticum aestivum L.). Lin, Fanyun,Xu, Jianhong,Shi, Jianrong,Li, Hongwei,Li, Bin.

作者其他论文 更多>>