Development of thirty-five novel polymorphic microsatellite markers in Pseudosciaena polyactis (Perciformes:Sciaenidae) and cross-species amplification in closely related species, Pseudosciaena crocea

文献类型： 外文期刊

第一作者： Chen, Wenming

作者： Chen, Wenming;Cheng, Qiqun;Chen, Wenming

作者机构：

关键词： Pseudosciaena polyactis;Pseudosciaena crocea;Microsatellite markers;Cross-species amplification;Genetic diversity

期刊名称：BIOCHEMICAL SYSTEMATICS AND ECOLOGY （ 影响因子：1.381； 五年影响因子：1.351 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Small yellow croaker, Pseudosciaena polyactis, is an economically important marine fishery species. In this study, we isolated 35 novel polymorphic microsatellite primers in P. polyactis by using the combined biotin capture method. The polymorphism of each locus was assessed in 30 individuals from Donggang, Northern Yellow Sea, China. A total of 519 alleles were detected and the number of alleles per locus ranged from 3 to 23. The PLC values of these 35 microsatellite loci ranged from 0.367 to 0.940. The observed (H-o) and expected heterozygosity (H-e) per locus ranged from 0.233 to 1.000 and from 0.438 to 0.943, respectively. Seven loci significantly deviated from Hardy-Weinberg equilibrium (HWE) after Bonferroni correction and no significant linkage disequilibrium (LD) was found between pairs of loci. In addition, cross-species amplification was performed in Pseudosciaena crocea, a closely related species of P. polyactis, to assess the applicability of these markers. These polymorphic microsatellites will provide useful tools for the study of genetic diversity and population structure of P. polyactis and P. crocea

分类号： Q5

  • 相关文献

[1]Isolation and characterization of 11 microsatellite markers for the large yellow croaker, Pseudosciaena crocea. Chang, Y. M.,Liang, L. Q.,Ding, L.,Wang, W. W.,He, J. G.,Lei, Q. Q.. 2009

[2]Isolation and characterization of 31 polymorphic microsatellite markers in barfin flounder (Verasper moseri) and the cross-species amplification in spotted halibut (Verasper variegatus). Ma, Hongyu,Chen, Songlin,Ma, Hongyu. 2009

[3]Polymorphic microsatellite markers in the false kelpfish Sebastiscus marmoratus: isolation, characterization, and cross-species amplification. Liu, H. B.,Liu, H. B.,Liu, S. F.,Ye, J. B.,Yuan, Y. J.,Zhuang, Z. M.,Yuan, Y. J.,Ding, S. X.. 2014

[4]Development of thirty-four novel polymorphic microsatellite markers in Coilia ectenes (Clupeiformes: Engraulidae) and cross-species amplification in two closely related taxa. Chen, Fang,Zeng, Liyan,Cheng, Qiqun,Chen, Fang. 2012

[5]Cross-species applicability of chicken microsatellite markers for investigation of genetic diversity in Indian duck (Anas platyrhynchos) populations. Mukesh,Sathyakumar, S.,Mukesh,Javed, Ruheena,Javed, Ruheena,Gaur, Uma,Han Jianlin. 2011

[6]Isolation via enrichment and characterization of 14 dinucleotide microsatellite loci in one catfish, Glyptosternum maculatum and cross-amplification in other related taxa. Guo, Baoying,Xie, Congxin,Li, Hongjing,Shan, Lei,Wang, Huanling,Huo, Bin,Zhou, Qing,Zhang, Yan.

[7]Analysis of microsatellite DNA polymorphisms in five China native cattle breeds and application to population genetics studies. Jin, HG,Zhao, YM,Zhou, GL. 2005

[8]Genetic variation in the invasive weed Mikania micrantha (Asteraceae) suggests highways as corridors for its dispersal in southern China. Chen, Quan,Cai, Wen-Li,Cao, Ao-Cheng,Ou-Yang, Can-Bin. 2017

[9]Isolation and characterization of 30 novel polymorphic microsatellite loci from Japanese halfbeak, Hyporhamphus sajori (Temminck et Schlegel, 1846). Xing, Shi-Chao,Xu, Gen-Bo,Liu, Shan-Shan,Liao, Xiao-Lin,Tian, Yong-sheng,Chen, Song-Lin,Xing, Shi-Chao,Yang, Guan-Pin.

[10]Genetic diversity in Chinese modern wheat varieties revealed by microsatellite markers. Hao Chenyang,Wang Lanfen,Zhang Xueyong,You Guangxia,Dong Yushen,Jia Jizeng,Liu Xu,Shang Xunwu,Liu Sancai,Cao Yongsheng.

[11]Microsatellite DNA loci from the drought desert plant Calligonum mongolicum Turcz. (Polygonaceae). Zhang, Qian,Zhu, Xue-Tai.

[12]Genetic diversity analysis of rive cattle breeds native to China using microsatellites. Zhou, GL,Jin, HG,Zhu, Q,Guo, SL,Wu, YH. 2005

[13]Study on Gennetic Diversity of 7 Rabbit Populations Evidenced by Microsatellite Makers. Wu Tian-Wen,Xu Gui-Jiang,Li Bi-Chun,Wu Xin-Sheng,Pan Yu-Lai,Xie Xi-Ping. 2010

[14]Isolation and characterization of microsatellite markers for Axonopus compressus (Sw.) Beauv. (Poaceae) using 454 sequencing technology. Wang, X. -L.,Liao, L.,Wang, Z. -Y.,Li, Y.,Bai, C. -J.. 2015

[15]The Genetic Diversity of Hainan Black Goat by Capillary Gel Electrophoresis with Microsatellite Markers in Tropical Area of China. Zhou, H. L.,Guan, S.,Hou, G. Y.,Wang, D. J.,Xu, T. S.,Wang, D. F.,Shi, L. G.,Rong, G.,Li, M.. 2012

[16]Inbreeding and genetic diversity analysis in a hatchery release population and clones of Rhopilema esculentum based on microsatellite markers. Tian Tao,Chen Zaizhong,Wang Mosang,Tian Tao,Wang Mosang,Hu Yulong,Wang Weiji,Wang Weiji. 2017

[17]Isolation and characterization of 10 polymorphic microsatellite loci from small yellow croaker (Pseudosciaena polyactis). Chen, Song-Lin,Xing, Shi-Chao,Xu, Gen-Bo,Liao, Xiaolin,Yang, Jing-Feng,Xing, Shi-Chao. 2009

[18]Effect of hypoxia on the blood of large yellow croaker (Pseudosciaena crocea). Gu Xiaolian,Xu Zhaoli. 2011

[19]Effect of Dietary Olaquindox on the Growth of Large Yellow Croaker (Pseudosciaena crocea R.) and the Distribution of Its Residues in Fish Tissues. Li Huitao,Mai Kangsen,Ai Qinghui,Zhang Lu,Wang Weifang,Zhang Chunxiao. 2014

[20]Germplasm of breeding Pseudosciaena crocea as revealed by microsatellite markers. Chang Yumei,Ding Lei,Liang Liqun,Chang Yumei,He Jianguo,Ding Lei,Li Mingyun,Xue Liangyi,Liang Liqun,Lei Qingquan. 2008

作者其他论文 更多>>

微信小程序