CNN3 is regulated by microrna-1 during muscle development in pigs

文献类型: 外文期刊

第一作者: Tang, Zhonglin

作者: Tang, Zhonglin;Liang, Ruyi;Zhao, Shuanping;Wang, Ruiqi;Li, Kui;Liang, Ruyi;Huang, Ruihua

作者机构:

关键词: CNN3;Development;miR-1;Pig;Skeletal muscle

期刊名称:INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES ( 影响因子:6.58; 五年影响因子:6.478 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: The calponin 3 (CNN3) gene has important functions involved in skeletal muscle development. MicroRNAs (miRNAs) play critical role in myogenesis by influencing the mRNA stability or protein translation of target gene. Based on paired microRNA and mRNA profiling in the prenatal skeletal muscle of pigs, our previous study suggested that CNN3 was differentially expressed and a potential target for miR-1. To further understand the biological function and regulation mechanism of CNN3, we performed co-expression analysis of CNN3 and miR-1 in developmental skeletal muscle tissues (16 stages) from Tongcheng (a Chinese domestic breed, obese-type) and Landrace (a Western, lean-type) pigs, respectively. Subsequently, dual luciferase and western blot assays were carried out. During skeletal muscle development, we observe a significantly negative expression correlation between the miR-1 and CNN3 at mRNA level. Our dual luciferase and western blot results suggested that the CNN3 gene was regulated by miR-1. We identified four single nucleotide polymorphisms (SNPs) contained within the CNN3 gene. Association analysis indicated that these CNN3 SNPs are significantly associated with birth weight (BW) and the 21 -day weaning weight of the piglets examined. These facts indicate that CNN3 is a candidate gene associated with growth traits and regulated by miR-1 during skeletal muscle development in pigs.

分类号: Q

  • 相关文献

[1]Wnt antagonist, secreted frizzled-related protein 1, is involved in prenatal skeletal muscle development and is a target of miRNA-1/206 in pigs. Yang, Yalan,Sun, Wei,Wang, Ruiqi,Zhou, Rong,Tang, Zhonglin,Li, Kui,Yang, Yalan,Tang, Zhonglin,Li, Kui,Sun, Wei,Lei, Chuzhao. 2015

[2]OLFML3 expression is decreased during prenatal muscle development and regulated by microRNA-155 in pigs. Zhao, Shuanping,Zhang, Jing,Hou, Xinhua,Tang, Zhonglin,Li, Kui,Zhao, Shuanping,Zhang, Jing,Hou, Xinhua,Tang, Zhonglin,Li, Kui,Zan, Linsen,Wang, Ning.

[3]SFRP2 affects prenatal muscle development and is regulated by microRNA-1/206 in pigs. Ma Yan-jiao,Ma Yan-jiao,Yang Ya-lan,Zhou Rong,Li Kui,Tang Zhong-lin,Sun Wei.

[4]Identifying suitable reference genes for gene expression analysis in developing skeletal muscle in pigs. Niu, Guanglin,Yang, Yalan,Zhang, YuanYuan,Hua, Chaoju,Wang, Zishuai,Tang, Zhonglin,Li, Kui,Niu, Guanglin,Yang, Yalan,Tang, Zhonglin,Li, Kui. 2016

[5]Expression of the insulin-like growth factor system in skeletal muscle during embryonic and postnatal development in the first filial generation pigs from Erhualian and Yorkshire reciprocal crosses. Wang, Lijuan,Lin, Fei,Jiang, Baochun,Dong, Fulu,Liu, Honglin,Zhang, Guangmin. 2011

[6]Molecular characterization and expression analysis of the porcine caveolin-3 gene. Zhu, Zhengmao,Li, Yong,Mo, Delin,Li, Kui,Zhao, Shuhong.

[7]Genome-wide profiling of Sus scrofa circular RNAs across nine organs and three developmental stages. Liang, Guoming,Yang, Yalan,Niu, Guanglin,Tang, Zhonglin,Li, Kui,Liang, Guoming,Yang, Yalan,Tang, Zhonglin,Li, Kui,Liang, Guoming,Yang, Yalan,Tang, Zhonglin.

[8]Long non-coding RNA analysis of muscular responses to testosterone deficiency in Huainan male pigs. Xing, Baosong,Bai, Xianxiao,Guo, Hongxia,Chen, Junfeng,Hua, Liushuai,Zhang, Jiaqing,Ma, Qiang,Ren, Qiaoling,Wang, Jing,Wang, Huashuai.

[9]The expression patterns of DNA methylation reprogramming related genes are associated with the developmental competence of cloned embryos after zygotic genome activation in pigs. Huan, Yanjun,Wang, Hongmei,He, Hongbin,Huan, Yanjun,Liu, Zhonghua,Wu, Zhanfeng,Zhang, Jiguang.

[10]Effects of Carbon Concentrations and Carbon to Nitrogen ratios on Sporulation of Two Biological Control Fungi as Determined by Different Culture Methods. Liu, Xingzhong,Gao, Li.

[11]CIDE gene expression in adipose tissue, liver, and skeletal muscle from obese and lean pigs. Qiu, Yue-qin,Yang, Xue-fen,Ma, Xian-yong,Xiong, Yun-xia,Tian, Zhi-mei,Fan, Qiu-li,Wang, Li,Jiang, Zong-yong. 2017

[12]Copy Number Variation in SOX6 Contributes to Chicken Muscle Development. Lin, Shudai,Lin, Xiran,Zhang, Zihao,Jiang, Mingya,Nie, Qinghua,Zhang, Xiquan,Rao, Yousheng. 2018

[13]Circular RNAs are abundant and dynamically expressed during embryonic muscle development in chickens. Ouyang, Hongjia,Chen, Xiaolan,Wang, Zhijun,Yu, Jiao,Jia, Xinzheng,Li, Zhenhui,Luo, Wei,Abdalla, Bahareldin Ali,Jebessa, Endashaw,Nie, Qinghua,Zhang, Xiquan,Ouyang, Hongjia,Chen, Xiaolan,Wang, Zhijun,Yu, Jiao,Jia, Xinzheng,Li, Zhenhui,Luo, Wei,Abdalla, Bahareldin Ali,Jebessa, Endashaw,Nie, Qinghua,Zhang, Xiquan,Ouyang, Hongjia,Chen, Xiaolan,Wang, Zhijun,Yu, Jiao,Jia, Xinzheng,Li, Zhenhui,Luo, Wei,Abdalla, Bahareldin Ali,Jebessa, Endashaw,Nie, Qinghua,Zhang, Xiquan. 2018

[14]Identification and comparison of microRNAs from skeletal muscle and adipose tissues from two porcine breeds. Li, Hong-Yi,Xi, Qian-Yun,Liu, Xiao-Long,Cheng, Xiao,Shu, Gang,Wang, Song-Bo,Wang, Li-Na,Gao, Ping,Zhu, Xiao-Tong,Jiang, Qing-Yan,Zhang, Yong-Liang,Xiong, Yuan-Yan,Yuan, Li. 2012

[15]Activation of mammalian target of rapamycin signaling in skeletal muscle of neonatal chicks: Effects of dietary leucine and age. Deng, Huiling,Zheng, Aijuan,Liu, Guohua,Chang, Wenhuan,Zhang, Shu,Cai, Huiyi. 2014

[16]Loss-of-function myostatin mutation increases insulin sensitivity and browning of white fat in Meishan pigs. Cai, Chunbo,Qian, Lili,Jiang, Shengwang,Wang, Qingqing,Ma, Dezun,Xiao, Gaojun,Li, Biao,Xie, Shanshan,Gao, Ting,Cui, Wentao,Li, Kui,Cai, Chunbo,Qian, Lili,An, Xiaorong,Gao, Ting,Chen, Yaoxing,Sun, Youde,Liu, Jie. 2017

[17]Proteomic Analysis of Chicken Skeletal Muscle during Embryonic Development. Ouyang, Hongjia,Wang, Zhijun,Chen, Xiaolan,Yu, Jiao,Li, Zhenhui,Nie, Qinghua,Ouyang, Hongjia,Wang, Zhijun,Chen, Xiaolan,Yu, Jiao,Li, Zhenhui,Nie, Qinghua,Ouyang, Hongjia,Wang, Zhijun,Chen, Xiaolan,Yu, Jiao,Li, Zhenhui,Nie, Qinghua. 2017

[18]The Effect of Muscle-Regulatory Factor Genes and Satellite Cell Response to Recombinant Hsp70 Protein on Megalobrama amblycephala Skeletal Muscle. Zhu, Kecheng,Zhang, Dianchang,Wang, Huanling,Zhu, Kecheng,Zhang, Dianchang,Wang, Huanling. 2016

[19]Comparison of muscle characteristics and underpinning mechanisms between Texel and Ujumqin sheep aged from day 70 to 135 of gestation. Li, Li,Wang, Linjie,Zhong, Tao,Zhang, Hongping,Su, Hongwei,Liu, Wenzhong,Wei, Caihong,Xu, Lingyang,Zhao, Fuping,Zhang, Li,Du, Lixin,Ren, Hangxing.

[20]Porcine skeletal muscle differentially expressed gene CMYA1: isolation, characterization, mapping, expression and association analysis with carcass traits. Xu, X. L.,Xu, X. W.,Pan, P. W.,Yu, M.,Liu, B.,Xu, X. L.,Xu, X. W.,Pan, P. W.,Yu, M.,Liu, B.,Li, K.,Jiang, Z. H.,Rothschild, M. F.,Rothschild, M. F..

作者其他论文 更多>>
  • EXPERT expands prime editing efficiency and range of large fragment edits

    作者:Xiong, Youcai;Su, Yinyu;He, Ruigao;Han, Xiaosong;Li, Sheng;Liu, Minghuan;Xi, Xiaoning;Liu, Zijia;Wang, Heng;Xie, Shengsong;Xu, Xuewen;Li, Xinyun;Zhao, Shuhong;Ruan, Jinxue;Xiong, Youcai;Su, Yinyu;He, Ruigao;Han, Xiaosong;Li, Sheng;Liu, Minghuan;Xi, Xiaoning;Liu, Zijia;Wang, Heng;Xie, Shengsong;Xu, Xuewen;Li, Xinyun;Zhao, Shuhong;Ruan, Jinxue;Han, Xiaosong;Zhao, Shuhong;Xie, Shengsong;Xu, Xuewen;Li, Xinyun;Zhao, Shuhong;Xie, Shengsong;Xu, Xuewen;Li, Xinyun;Zhao, Shuhong;Li, Kui;Zhang, Jifeng;Xu, Jie

    关键词:

  • Genome-Wide Silencer Screening Reveals Key Silencer Modulating Reprogramming Efficiency in Mouse Induced Pluripotent Stem Cells

    作者:Zhu, Xiusheng;Huang, Lei;Li, Guoli;Deng, Biao;Wang, Xiaoxiao;Yang, Hu;Zhang, Yuanyuan;Wen, Qiuhan;Wang, Chao;Zhang, Jingshu;Li, Kui;Liu, Yuwen;Deng, Biao;Deng, Biao;Zhao, Yunxiang

    关键词:cis-regulatory elements; high-throughput; iPSCs; silencer; Ss-STARR-seq

  • Transcriptome analysis reveals no obvious unintended effects in the spleen of CRISPR/Cas9-mediated CD163 and pAPN double-knockout pigs

    作者:Liu, Zhi-Guo;Wang, Nan;Wang, Wan-Jie;Chi, Shun-Shun;Nie, Yu-Xin;Yuan, Mao-Sha;Sun, Ya-Ru;Mu, Yu-Lian;Li, Kui;Wang, Nan;Huang, Lei;Chi, Shun-Shun;Li, Kui

    关键词:CD163; pAPN; Double-knockout; Gene editing; Pig; Spleen; Unintended effects; Transcriptomics

  • PIGOME: An Integrated and Comprehensive Multi-omics Database for Pig Functional Genomics Studies

    作者:Han, Guohao;Yang, Peng;Li, Qiaowei;Fan, Xinhao;Chen, Ruipu;Yan, Chao;Zeng, Mu;Yang, Yalan;Tang, Zhonglin;Han, Guohao;Yang, Peng;Zhang, Yongjin;Li, Qiaowei;Fan, Xinhao;Chen, Ruipu;Yan, Chao;Zeng, Mu;Yang, Yalan;Tang, Zhonglin;Han, Guohao;Yang, Peng;Zhang, Yongjin;Li, Qiaowei;Fan, Xinhao;Chen, Ruipu;Yan, Chao;Zeng, Mu;Yang, Yalan;Tang, Zhonglin;Yang, Peng;Tang, Zhonglin;Yang, Peng;Li, Qiaowei;Zeng, Mu

    关键词:Pig; Multi-omics; Genome; Gene expression; Epigenetics; Database

  • Integrating large-scale meta-GWAS and PigGTEx resources to decipher the genetic basis of 232 complex traits in pigs

    作者:Xu, Zhiting;Lin, Qing;Cai, Xiaodian;Zhong, Zhanming;Teng, Jinyan;Zeng, Haonan;Gao, Yahui;Wei, Chen;Zhou, Jun;Zhang, Wenjing;Zhang, Xiaoke;Shi, Shaolei;Wu, Jun;Diao, Shuqi;Liu, Yuqiang;Pan, Xiangchun;Feng, Xueyan;Liu, Ruiqi;Su, Zhanqin;Chang, Chengjie;Zhu, Qianghui;Wu, Yuwei;Zhang, Hao;Yuan, Xiaolong;Li, Jiaqi;Zhang, Zhe;Li, Bingjie;Gao, Yahui;Liu, George E.;Gao, Yahui;Ma, Li;Cai, Zexi;Bai, Zhonghao;Su, Guosheng;Sahana, Goutam;Lund, Mogens Sando;Fang, Lingzhao;Wang, Xiaoqing;Shi, Liangyu;Zhao, Fuping;Wang, Xue;Wang, Yi;Zhang, Zipeng;Ding, Xiangdong;Lin, Yu;Tang, Guoqing;Li, Mingzhou;Li, Xuewei;Liu, Shuli;Yin, Hongwei;Bai, Lijing;Li, Kui;Zhou, Zhongyin;Wang, Qishan;Pan, Yuchun;Xu, Zhong;Peng, Xianwen;Mei, Shuqi;Mo, Delin;Liu, Xiaohong;Chen, Yaosheng;Liu, Yang;Xiang, Ruidong;Xiang, Ruidong;Shen, Xia;Shen, Xia;Shen, Xia;Li, Pinghua;Huang, Ruihua;Li, Pinghua;Huang, Ruihua;Ballester, Maria;Crespo-Piazuelo, Daniel;Amills, Marcel;Clop, Alex;Amills, Marcel;Karlskov-Mortensen, Peter;Fredholm, Merete;Zhang, Qin;Zhao, Yunxiang

    关键词:pig; meta-GWAS; PigGTEx; molQTL; complex traits

  • SIZ1 SUMOylates and stabilizes WRI1 to safeguard seed filling and fatty acid biosynthesis under high-temperature stress

    作者:Huang, Ruihua;Wen, Mengrui;Feng, Bojin;Zhong, Xiaoqing;Yang, Yifeng;Liu, Minghui;Li, Hongqing;Yang, Chengwei;Peng, Changlian;Zhang, Shengchun;Wu, Pingzhi

    关键词:

  • Multi-dimensional annotation of porcine variants using genomic and epigenomic features in pigs

    作者:Yin, Hongwei;Yang, Liu;Zhao, Qianyi;Yao, Wenye;Bai, Lijing;Li, Kui;Fang, Lingzhao;Yao, Wenye;Groenen, Martien A. M.;Madsen, Ole;Teng, Jinyan;Gao, Yahui;Xu, Zhiting;Lin, Qing;Diao, Shuqi;Li, Jiaqi;Zhang, Zhe;Zhou, Huaijun;Guan, Dailu;Liu, Xiaohong;Zhao, Fuping;Zhou, Zhongyin;Wang, Qishan

    关键词:Genomic variants; Gene expression and splicing; Complex traits; Non-coding regions; Epigenome