Universal vectors for constructing artificial microRNAs in plants

文献类型: 外文期刊

第一作者: Zhou, Jie

作者: Zhou, Jie;Yu, Feibo;Chen, Bin;Wang, Xuming;Yang, Yong;Cheng, Ye;Yan, Chengqi;Chen, Jianping

作者机构:

关键词: microRNA;Silencing;Universal amiRNA;vectors Vectors

期刊名称:BIOTECHNOLOGY LETTERS ( 影响因子:2.461; 五年影响因子:2.457 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Universal amiRNA vectors (pUAs) for constructing plant amiRNAs in Arabidopsis and rice have been developed. By using type IIg restriction enzyme, BaeI, a single amiRNA construct can be produced using only one PCR and one ligation reaction. Thus, only one pair of primers is required for each amiRNA vector and these can be designed to be compatible with existing or newly developed methods. Because the BaeI recognition sequence is completely digested, there is no modification to the miRNA backbone, therefore avoids the risk of sequence changes that may affect downstream analysis. Based on these vectors, specific amiRNA constructs were created and verified. With optimized parameters, 38-45 % colonies for each amiRNA construct contain insertions with the expected orientation, and approximately 80 % of these colonies have the correct sequences.

分类号: Q7

  • 相关文献

[1]High-throughput sequencing discovery of conserved and novel microRNAs in Chinese cabbage (Brassica rapa L. ssp pekinensis). Wang, Fengde,Li, Libin,Liu, Lifeng,Li, Huayin,Zhang, Yihui,Gao, Jianwei,Yao, Yingyin,Ni, Zhongfu. 2012

[2]Genome-wide identification of microRNAs and their targets in wild type and phyB mutant provides a key link between microRNAs and the phyB-mediated light signaling pathway in rice. Sun, Wei,wu, Xiu,Xie, Xianzhi,Xu, Xiao Hui,Lu, Xingbo,Sun, Hongwei,Wang, Yong. 2015

[3]Identification of Splice Variants, Targeted MicroRNAs and Functional Single Nucleotide Polymorphisms of the BOLA-DQA2 Gene in Dairy Cattle. Hou, Qinlei,Huang, Jinming,Ju, Zhihua,Li, Qiuling,Li, Liming,Wang, Changfa,Sun, Tao,Wang, Lingling,Hou, Minghai,Zhong, Jifeng,Hang, Suqin.

[4]Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein Cattle. Huang, Jinming,Ju, Zhihua,Li, Qiuling,Hou, Qinlei,Wang, Changfa,Li, Jianbin,Li, Rongling,Wang, Lingling,Sun, Tao,Hang, Suqin,Gao, Yundong,Hou, Minghai,Zhong, Jifeng.

[5]Difference in miRNA expression profiles between two cotton cultivars with distinct salt sensitivity. Zujun Yin,Yan Li,Jiwen Yu,Yudong Liu,Chunhe Li,Xiulan Han,Fafu Shen.

[6]Virus-Based MicroRNA Silencing and Overexpressing in Common Wheat (Triticum aestivum L.). Jian, Chao,Chi, Qing,Wang, Shijuan,Ma, Meng,Liu, Xiangli,Zhao, Huixian,Han, Ran,Zhao, Huixian. 2017

[7]Integrated mRNA and microRNA transcriptome variations in the multi-tepal mutant provide insights into the floral patterning of the orchid Cymbidium goeringii. Yang, Fengxi,Zhu, Genfa,Wang, Zhen,Liu, Hailin,Huang, Dan,Zhao, Chaoyi,Xu, Qingquan. 2017

[8]Gene screening and differential expression analysis of microRNAs in the middle silk gland of wild-type and naked pupa mutant silkworms (Bombyx mori). Qian, Ping,Wang, Xin,Jiang, Tao,Song, Fei,Chen, Chen,Fan, Yangyang,Shen, Xingjia,Qian, Ping,Shen, Xingjia. 2016

[9]Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus. Bai, Yun,Jin, Lei,Kang, Hui,Zhu, Yongqiang,Zhang, Lu,Li, Xia,Ma, Fengshou,Wang, Shengyue,Zhang, Zhuangzhi,Zhao, Li,Shi, Baoxin,Li, Jun,Zhang, Wenbao,McManus, Donald P.. 2014

[10]A comprehensive microRNA expression profile of the backfat tissue from castrated and intact full-sib pair male pigs. Bai, Ying,Huang, Jin-Ming,Liu, Gang,Zhang, Ji-Bin,Liu, Cheng-Kun,Fang, Mei-Ying,Huang, Jin-Ming,Wang, Jian-Ying. 2014

[11]The role of miR319a and its target gene TCP4 in the regulation of pistil development in Prunus mume. Wang, Wanxu,Shi, Ting,Ni, Xiaopeng,Xu, Yanshuai,Qu, Shenchun,Gao, Zhihong,Wang, Wanxu. 2018

[12]Discovering conserved insect microRNAs from expressed sequence tags. Yu, Lun,Li, Fei,Lin, Kejian,Liang, Jingdong. 2010

[13]Integrative Analyses of miRNA-mRNA Interactions Reveal let-7b, miR-128 and MAPK Pathway Involvement in Muscle Mass Loss in Sex-Linked Dwarf Chickens. Luo, Wen,Li, Guihuan,Nie, Qinghua,Zhang, Xiquan,Luo, Wen,Li, Guihuan,Nie, Qinghua,Zhang, Xiquan,Luo, Wen,Li, Guihuan,Nie, Qinghua,Zhang, Xiquan,Lin, Shumao. 2016

[14]Identification and comparative profiling of ovarian and testicular microRNAs in the swimming crab Portunus trituberculatus. Liu, Ping. 2018

[15]microRNA/microRNA* complementarity is important for the regulation pattern of NFYA5 by miR169 under dehydration shock in Arabidopsis. Du, Qingguo,Gao, Wei,Sun, Suzhen,Li, Wen-Xue,Zhao, Meng. 2017

[16]Identification of Drought-Responsive MicroRNAs from Roots and Leaves of Alfalfa by High-Throughput Sequencing. Li, Yue,Wan, Liqiang,Bi, Shuyi,Wan, Xiufu,Li, Zhenyi,Cao, Jing,Tong, Zongyong,Xu, Hongyu,He, Feng,Li, Xianglin. 2017

[17]Characterization of skin ulceration syndrome associated microRNAs in sea cucumber Apostichopus japonicus by deep sequencing. Li, Chenghua,Feng, Weida,Xia, Changge,Su, Xiurong,Jin, Chunhua,Zhou, Tingting,Zeng, Yuan,Li, Taiwu,Qiu, Lihua,Li, Taiwu. 2012

[18]Identification of androgenic gland microRNA and their target genes to discover sex-related microRNA in the oriental river prawn, Macrobrachium nipponense. Jin, S. B.,Fu, H. T.,Jin, S. B.,Fu, H. T.,Jiang, S. F.,Xiong, Y. W.,Qiao, H.,Zhang, W. Y.,Gong, Y. S.,Wu, Y.. 2015

[19]MDTE DB: A Database for MicroRNAs Derived from Transposable Element. Wei, Guanyun,Li, Wenjuan,Ma, Fei,Wei, Guanyun,Li, Wenjuan,Ma, Fei,Qin, Sheng,Qin, Sheng,Chen, Liming. 2016

[20]Identification and characterization of microRNAs in the ovaries of multiple and uniparous goats (Capra hircus) during follicular phase. Ling, Ying-Hui,Ren, Chun-Huan,Guo, Xiao-Fei,Huang, Ya-Feng,Luo, Jian-Chuan,Zhang, Yun-Hai,Zhang, Xiao-Rong,Zhang, Zi-Jun,Ling, Ying-Hui,Ren, Chun-Huan,Guo, Xiao-Fei,Huang, Ya-Feng,Luo, Jian-Chuan,Zhang, Yun-Hai,Zhang, Xiao-Rong,Zhang, Zi-Jun,Xu, Li-Na. 2014

作者其他论文 更多>>