Isolation and characterization of twenty polymorphic microsatellites for Hemibarbus labeo (Cyprinidae)

文献类型: 外文期刊

第一作者: Lu, Cuiyun

作者: Lu, Cuiyun;Gu, Ying;Geng, Longwu;Cheng, Lei;Li, Chao;Tong, Guangxiang;Jiang, Haifeng;Xu, Wei;Sun, Xiaowen;Mahboob, Shahid

作者机构:

关键词: Hemibarbus labeo;Microsatellite;Genetic conservation

期刊名称:CONSERVATION GENETICS RESOURCES ( 影响因子:0.973; 五年影响因子:0.946 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Hemibarbus labeo is a valuable freshwater fish species distributed in the Heilongjiang River basin in China. Wild resources have declined sharply in recent years because of overfishing and pollution. Herein, twenty polymorphic microsatellites were isolated from an enriched genomic library in H. labeo for genetic conservation. These markers were characterized in 27 wild and 48 cultured individuals. The number of alleles per locus ranged from two to ten, with an average of 5.200. The observed heterozygosity and the expected heterozygosity varied from 0.086 to 0.870 (mean = 0.538) and from 0.116 to 0.861 (mean = 0.5441), respectively. Three and two loci significantly deviated from Hard-Weinberg equilibrium in wild and cultured individuals, respectively. Three pairwise comparisons of six loci showed significant genotypic linkage disequilibrium in cultured individuals. These polymorphic markers represent a powerful tool to study population genetic diversity, genetic conservation and breeding systems in H. labeo.

分类号: Q1

  • 相关文献

[1]A first set of polymorphic microsatellite loci isolated from Rhinogobio cylindricus. Duan, Xin Bin,Chen, Da Qing,Liu, Shao Ping,Liu, Hong Yan,Xiong, Fei,Zhang, Fan Rrong,Yang, Dong,Yu, Lai Ning.

[2]Establishment and characterization of a Chinese Game chicken embryo fibroblast bank. Li, Xiangchen,Bai, Chunyu,Su, Xiaohua,Jin, Dapeng,Zhao, Qianjun,He, Xiaohong,Guan, Weijun,Ma, Yuehui,Bai, Chunyu,Jin, Dapeng,Su, Xiaohua.

[3]Establishment and biological research of the Jining Grey goat fibroblast line. Bai, Chunyu,Su, Xiaohua,Guan, Weijun,Ma, Yuehui,Bai, Chunyu,Zhang, Minghai,Wang, Dianjun. 2012

[4]Establishment and biological characteristics of a jingning chicken embryonic fibroblast bank. Bai, C.,Jin, D.,Li, C.,Guan, W.,Ma, Y.,Wang, D.,Li, C..

[5]Attempt at conserving the genetic resources of Hu sheep by fibroblast line cryopreservation. Li, Xiangchen,Hu, Pengfei,He, Xiaohong,Lu, Taofeng,Guan, Weijun,Ma, Yuehui.

[6]Genetic diversity in Chinese sorghum landraces revealed by chloroplast simple sequence repeats. Li, Ruyu,Zhang, Chunqing,Li, Ruyu,Zhang, Han,Guan, Yanan,Yao, Fengxia,Song, Guoan,Wang, Jiancheng,Zhou, Xincheng.

[7]Development of microsatellite markers for genetic diversity analysis of Dendrobium loddigesii Rolfe, an endangered orchid in China. Cai, Xiaoyan,Feng, Zhenyu,Hou, Beiwei,Xing, Wenrui,Ding, Xiaoyu,Cai, Xiaoyan.

[8]A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs. Zheng, Xianhu,Kuang, Youyi,Zhang, Xiaofeng,Lu, Cuiyun,Cao, Dingchen,Li, Chao,Sun, Xiaowen,Zheng, Xianhu. 2011

[9]Polymorphism of microsatellite sequence within ABC transporter genes in phytopathogenic fungus, Magnaporthe grisea. Li, Jinbin,Liu, Lin,Li, Chengyun,Yang, Jing,Su, Yuan,Wang, Yunyue,Xie, Yong,Zhu, Youyong. 2008

[10]Development of microsatellite markers for Leptobotia rubrilaris, a threatened fish species in the Yangtze River. Duan, Xin Bin,Chen, Da Qing,Liu, Hong Yan,Xiong, Fei. 2013

[11]Conservation genetics in Chinese sheep: diversity of fourteen indigenous sheep (Ovis aries) using microsatellite markers. E, Guang-Xin,Zhao, Yong-Ju,Zhang, Jia-Hua,Huang, Yong-Fu,Zhong, Tao,Ma, Yue-Hui,Gao, Hui-Jiang,He, Jian-Ning,Liu, Nan. 2016

[12]Isolation and analysis of microsatellites in the genome of turbot (Scophthalmus maximus L.). Ruan, Xiaohong,Hu, Jingjie,Ruan, Xiaohong,Wang, Weiji,Kong, Jie. 2011

[13]Genetic variation and population structure of the oriental fruit moth Grapholita molesta in Shanxi, a major pome fruits growing region in North China. Yang, Jing,Liu, Zhong-Fang,Fan, Ji-Qiao,Fan, Ren-Jun,Yang, Jing,Liu, Zhong-Fang,Fan, Ji-Qiao,Fan, Ren-Jun,Wu, Yu-Peng,Ma, Rui-Yan. 2016

[14]Polymorphic microsatellite loci for population studies of the Japanese scallop, Patinopecten yessoensis. Zhao, Ying-Ying,Zhu, Xiao-Chen,Sun, Xiao-Wen,Liang, Li-Qun. 2007

[15]Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.). Xu, L. H.,Wang, C. H.,Wang, J.,Ma, Y. Q.,Yang, X. X.,Dong, Z. J.. 2012

[16]Isolation and Characterization of New 24 Microsatellite DNA Markers for Golden Cuttlefish (Sepia esculenta). Yuan, Yanjiao,Liu, Shufang,Bai, Cuicui,Liu, Hongbo,Zhuang, Zhimeng,Yuan, Yanjiao,Bai, Cuicui,Liu, Hongbo. 2012

[17]Simple sequence repeat-based analysis of the genetic diversity and population genetic structure of populations of Siniperca chuatsi. Sun, C. F.,Ye, X.,Tian, Y. Y.,Dong, J. J.. 2015

[18]Isolation and characterization of microsatellite loci in the purpleback flying squid (Sthenoteuthis oualaniensis). Lin, L.,Li, P.,Chen, Z. Z.,Xiao, Y. Y.,Xu, S. N.,Liu, Y.,Li, C. H.,Lin, L.,Chen, Z. Z.,Xiao, Y. Y.,Xu, S. N.,Liu, Y.,Li, C. H.,Li, P.. 2015

[19]High genetic diversity and differentiation in three red tilapia stocks revealed by microsatellite DNA marker analysis. Zhu, W. B.,Yang, H.,Yuan, X. H.,Dong, Z. J.,Fu, J. J.,Wang, L. M.,Su, S. Y.,Liu, N.,Song, F. B.,Chen, X. T.,Zhu, W. B.,Yuan, X. H.,Dong, Z. J.,Fu, J. J.,Wang, L. M.,Su, S. Y.. 2017

[20]Isolation and characterization of 21 polymorphic microstatellites in golden pompano Trachinotus ovatus. Sun, Liyuan,Zhang, Dianchang,Jiang, Shigui,Guo, Huayang,Zhu, Caiyan,Sun, Liyuan,Zhang, Dianchang,Jiang, Shigui. 2013

作者其他论文 更多>>