Identification and development of a functional marker from 6-SFT-A2 associated with grain weight in wheat

文献类型： 外文期刊

第一作者： Yue, Aiqin

作者： Yue, Aiqin;Li, Ang;Mao, Xinguo;Chang, Xiaoping;Jing, Ruilian;Yue, Aiqin;Li, Runzhi

作者机构：

关键词： Haplotype;Marker development;Association analysis;Thousand-grain weight;6-SFT;Triticum aestivum

期刊名称：MOLECULAR BREEDING （ 影响因子：2.589； 五年影响因子：2.75 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： As a class of water-soluble, fructose-based oligo-and polysaccharides, fructans are major nonstructural carbohydrates and an important carbon source for grain filling in wheat (Triticum aestivum L.). Four enzymes are involved in fructan synthesis in higher plants, and 6-SFT is a key enzyme in fructan biosynthesis. In this study, thirteen single nucleotide polymorphisms were detected in 6-SFT-A2 in 24 wheat accessions, forming three haplotypes. Two cleaved amplified polymorphic sequence markers developed based on polymorphisms at sites 1870(AG) and 1951(A-G) distinguished the three haplotypes. 6-SFT-A2 was located on chromosome 4A, between markers P2454.3 and P3465.1 in a doubled haploid (DH) population derived from the cross Hanxuan 10 x Lumai 14. The DH population comprising 150 lines and a historical population consisting of 154 accessions were used in a 6-SFT-A2 marker-trait association analysis. The three haplotypes were significantly associated with thousand-grain weight (TGW) under rainfed conditions. HapIII had a significant positive effect on TGW. There were significant differences between the Hanxuan 10 and Lumai 14 genotypes in both rainfed and irrigated environments. The average TGW of Lumai 14 (HapIII) was higher than that of Hanxuan 10 (HapI). The frequencies of 6-SFT-A2 HapIII in cultivars released at different periods showed that it had been strongly positively selected in breeding programs. The preferred HapIII for TGW occurred at higher frequencies in Gansu, Beijing, Shanxi, and Hebei than other regions in northern China.

分类号： Q94

  • 相关文献

[1]Single-nucleotide polymorphisms, mapping and association analysis of 1-FFT-A1 gene in wheat. Yue Ai-qin,Li Run-zhi,Yue Ai-qin,Li Ang,Mao Xin-guo,Chang Xiao-ping,Jing Rui-lian. 2017

[2]ADP-glucose pyrophosphorylase genes, associated with kernel weight, underwent selection during wheat domestication and breeding. Hou, Jian,Li, Tian,Wang, Yamei,Hao, Chenyang,Liu, Hongxia,Zhang, Xueyong. 2017

[3]Polymorphism of TaSAP1-A1 and its association with agronomic traits in wheat. Chang, Jianzhong,Zhang, Jianan,Mao, Xinguo,Li, Ang,Jia, Jizeng,Jing, Ruilian.

[4]Haplotype analysis of the genes encoding glutamine synthetase plastic isoforms and their association with nitrogen-use- and yield-related traits in bread wheat. Li, Xin-Peng,Zhao, Xue-Qiang,He, Xue,Li, Bin,Liu, Dong-Cheng,Zhang, Ai-Min,Tong, Yi-Ping,Li, Zhen-Sheng,Zhao, Guang-Yao,Zhang, Xue-Yong. 2011

[5]Elite Haplotypes of a Protein Kinase Gene TaSnRK2.3 Associated with Important Agronomic Traits in Common Wheat. Miao, Lili,Wang, Zhenhua,Mao, Xinguo,Wang, Jingyi,Liu, Zicheng,Zhang, Bin,Li, Weiyu,Chang, Xiaoping,Jing, Ruilian,Mao, Xinguo,Reynolds, Matthew. 2017

[6]SNP and haplotype analysis reveal IGF2 variants associated with growth traits in Chinese Qinchuan cattle. Huang, Yong-Zhen,Zhan, Zhao-Yang,Li, Xin-Yi,Wu, Sheng-Ru,Sun, Yu-Jia,Xue, Jing,Lan, Xian-Yong,Lei, Chu-Zhao,Chen, Hong,Zhang, Chun-Lei,Jia, Yu-Tang.

[7]A haplotype block associated with thousand-kernel weight on chromosome 5DS in common wheat (Triticum aestivum L.). Wang, Yuquan,Zheng, Jun,Ma, Zhengqiang,Zhang, Xueyong,Wang, Yuquan,Zheng, Jun,Ma, Zhengqiang,Zhang, Xueyong,Wang, Yuquan,Hao, Chenyang,Zheng, Jun,Ge, Hongmei,Zhou, Yang,Zhang, Xueyong. 2015

[8]The wheat (T. aestivum) sucrose synthase 2 gene (TaSus2) active in endosperm development is associated with yield traits. Jiang, Qiyan,Hou, Jian,Hao, Chenyang,Wang, Lanfen,Dong, Yushen,Zhang, Xueyong,Ge, Hongmei.

[9]Functional Studies of Heading Date-Related Gene TaPRR73, a Paralog of Ppd1 in Common Wheat. Zhang, Wenping,Wu, Bihua,Zhang, Wenping,Zhao, Guangyao,Gao, Lifeng,Kong, Xiuying,Guo, Zhiai,Jia, Jizeng. 2016

[10]HapIII of TaSAP1-A1, a Positively Selected Haplotype in Wheat Breeding. Chang Jian-zhong,Hao Chen-yang,Chang Xiao-ping,Zhang Xue-yong,Jing Rui-lian. 2014

[11]Genetic dissection of a thousand-grain weight quantitative trait locus on rice chromosome 1. Yu ShouWu,Yang ChangDeng,Fan YeYang,Zhuang JieYun,Li XiMing.

[12]Large-scale microsatellite development in grasspea (Lathyrus sativus L.), an orphan legume of the arid areas. Yang, Tao,Jiang, Junye,Sun, Xuelian,Wang, Fang,Guan, Jianping,Zong, Xuxiao,Burlyaeva, Marina,Hu, Jinguo,Coyne, Clarice J.,Kumar, Shiv,Redden, Robert,Chang, Jianwu,Hao, Xiaopeng. 2014

[13]Development and application of EST-SSR to evaluate the genetic diversity of Southeast Asian rice planthoppers. Jiao, Xiaozhen,Hu, Dehui,Liu, Fang,Li, Rongbai,Huang, Fengkuan. 2016

[14]High-throughput novel microsatellite marker of faba bean via next generation sequencing. Yang, Tao,Jia, Teng-Jiao,Guan, Jian-Ping,Sun, Xue-Lian,Jiang, Jun-Ye,Zong, Xu-Xiao,Bao, Shi-Ying,He, Yu-Hua,Ford, Rebecca,Hao, Jun-Jie,Zhang, Xiao-Yan. 2012

[15]Mannose-binding lectin 1 haplotypes influence serum MBL-A concentration, complement activity, and milk production traits in Chinese Holstein cattle. Liu, Jianbo,Ju, Zhihua,Li, Qiuling,Huang, Jinming,Li, Rongling,Li, Jiangbin,Zhong, Jifeng,Wang, Changfa,Liu, Jianbo,Ma, Lijuan. 2011

[16]The relationship between the variants of the bovine MBL2 gene and milk production traits, mastitis, serum MBL-C levels and complement activity. Wang, Xinju,Ju, Zhihua,Huang, Jinming,Hou, Minghai,Zhou, Lei,Qi, Chao,Zhang, Yan,Gao, Qing,Pan, Qing,Zhong, Jifeng,Wang, Changfa,Wang, Xinju,Li, Guorong. 2012

[17]Single nucleotide polymorphisms, haplotypes and combined genotypes of LAP3 gene in bovine and their association with milk production traits. Zheng, Xue,Ju, Zhihua,Wang, Ji,Li, Qiuling,Huang, Jinming,Zhong, Jifeng,Wang, Changfa,Zheng, Xue,Zhang, Aiwu. 2011

[18]Molecular characterization of novel haplotypes of eIF4E family in Chinese cabbage (Brassica rapa L. ssp pekinensis). Liu, Shuan-Tao,Zhang, Zhi-Gang,Li, Qiao-Yun,Wang, Shu-Fen,Zhao, Zhi-Zhong,Lu, Jin-Dong,Xu, Wen-Ling,Liu, Xian-Xian,Fu, Wei-Min. 2013

[19]Regulatory mutations in the A2M gene are involved in the mastitis susceptibility in dairy cows. Wang, X. G.,Huang, J. M.,Feng, M. Y.,Ju, Z. H.,Wang, C. F.,Zhong, J. F.,Yang, G. W.,Yuan, J. D.. 2014

[20]Single nucleotide polymorphisms, haplotypes and combined genotypes of lactoferrin gene and their associations with mastitis in Chinese Holstein cattle. Huang, Jinming,Wang, Hongmei,Wang, Changfa,Li, Jianbin,Li, Qiuling,Hou, Minghai,Zhong, Jifeng.

作者其他论文 更多>>

微信小程序