Characterization of 25 single nucleotide polymorphism markers in the pearl oyster Pinctada martensii (Dunker)
文献类型: 外文期刊
第一作者: Zhang, Nan
作者: Zhang, Nan;Ma, Zhen-hua;Zhang, Dian-chang;Guo, Hua-yang;Jiang, Shi-gui;Zhang, Nan;Ma, Zhen-hua;Zhang, Dian-chang;Guo, Hua-yang;Jiang, Shi-gui;Wang, Ai-min
作者机构:
关键词: Pinctada martensii;Single nucleotide polymorphism (SNP);High-resolution melting (HRM) analysis
期刊名称:CONSERVATION GENETICS RESOURCES ( 影响因子:0.973; 五年影响因子:0.946 )
ISSN:
年卷期:
页码:
收录情况: SCI
摘要: Twenty-five single nucleotide polymorphism (SNP) markers were developed and characterized from the expressed sequence tags of the pearl oyster Pinctada martensii in this study. The SNP genotyping of the wild population and an artificially bred population was analyzed using unlabeled probe high resolution melting. All the loci contained two alleles, and the minor allele frequency ranged from 0.117 to 0.494. The observed and expected heterozygosities ranged from 0.234 to 0.767 and from 0.207 to 0.726 respectively. Three loci deviated significantly from Hardy-Weinberg equilibrium, and significant linkage dis-equilibrate was detected in two pairs of markers. Two loci deviated significantly from the Mendelian ratios (P < 0.05), suggesting that these two sites may be subject to selection pressure. Markers developed in this study can be used for population evaluation, parentage analysis and genetic improvement in P. martensii.
分类号: Q1
- 相关文献
作者其他论文 更多>>
-
Deciphering Trachinotus ovatus resistance to Streptococcus agalactiae:GWAS :GWAS identification of key SNPs and candidate genes
作者:Sun, Yi-Yao;Gao, Jie;Liu, Bao-Suo;Zhang, Nan;Guo, Hua-Yang;Zhu, Ke-Cheng;Xian, Lin;Zhang, Dian-Chang;Sun, Yi-Yao;Liu, Bao-Suo;Zhang, Nan;Guo, Hua-Yang;Zhu, Ke-Cheng;Xian, Lin;Zhang, Dian-Chang;Liu, Bao-Suo;Zhang, Nan;Zhu, Ke-Cheng;Zhang, Dian-Chang;Gao, Jie
关键词:GWAS; Trachinotus ovatus; Streptococcus agalactiae; SNP
-
Functional Characterization of Galectin-8 from Golden Pompano Trachinotus ovatus Reveals Its Broad-Spectrum Antimicrobial Activity
作者:Pan, Jin-Min;Gao, Jie;Liu, Ming Jian;Zhu, Ke-Cheng;Guo, Hua-Yang;Liu, Bao-Suo;Zhang, Nan;Zhang, Dian-Chang;Zhu, Ke-Cheng;Liu, Bao-Suo;Zhang, Nan;Zhang, Dian-Chang;Zhu, Ke-Cheng;Guo, Hua-Yang;Liu, Bao-Suo;Zhang, Nan;Zhang, Dian-Chang;Pan, Jin-Min;Gao, Jie
关键词:
Galectin-8 ; Antibacterial activity;Trachinotus ovatus ;Streptococcus agalactiae -
Effects of combined applications of S-nZVI and organic amendments on cadmium and arsenic accumulation in rice: Possible mechanisms and potential impacts on soil health
作者:Sun, Shuo;Zhang, Nan;Wang, Yanan;Zhang, Yang;Su, Shiming;Zeng, Xibai;Huang, Jiaqing;Wen, Jiong;Peng, Zhi
关键词:Cd & As immobilization; Combined application; Rice uptake Cd & As; Soil health; Soil health
-
Integrated, high-throughput metabolomics approach for metabolite analysis of four sprout types
作者:Yu, Junyan;Xu, Lei;Mi, Lu;Zhang, Nan;Xu, Zhenzhen;Yu, Junyan;Xu, Lei;Mi, Lu;Zhao, Jing;Xu, Zhenzhen;Liu, Fengjuan
关键词:MS-DIAL; MetaboAnalystR; Hydrophilic interaction chromatography; technique; Metabolomics; Sprouts
-
Enhanced wastewater treatment using biochar-supported layered-double-hydroxide composites
作者:Huang, Ao;Wang, Qian-Bin;Zhao, Bo-Han;Zhang, Rui-Bao;Cheng, Ming;Shi, Chen;Hao, Xiao-Di;Zhang, Nan;Shi, Chen
关键词:Sewage treatment; Modification method; Adsorption performance; Meta; analysis; Adsorption mechanism
-
Microbe-mediated synthesis of defect-rich CeO2 nanoparticles with oxidase-like activity for colorimetric detection of
l -penicillamine and glutathione作者:Zhang, Nan;Du, Yingyan;Zhu, Liying;Jiang, Ling;Jiang, Ling;Zhang, Zhidong
关键词:
-
Application of Fe-based S-rich material mitigates As and Cd toxicity in rice by alleviating root tip structural damage and improving bacterial community function
作者:Luo, Peisang;Sun, Mei;Rao, Zhongxiu;Feng, Qiufen;Sun, Yifei;Zhang, Nan;Wu, Cuixia;Zeng, Xibai;Su, Shiming;Luo, Peisang;Xu, Zhangqian;Sun, Yuanyuan
关键词:Heavy metals; Root tip; Passivator; Detoxify; Microbial community