Genetic variation in V gene of class II Newcastle disease virus

文献类型: 外文期刊

第一作者: Hao, Huafang

作者: Hao, Huafang;Liu, Peng;Ren, Shanhui;Gao, Xiaolong;Wang, Yanping;Wang, Xinglong;Zhang, Shixia;Yang, Zengqi;Chen, Shengli

作者机构:

关键词: Newcastle disease virus;V protein;Genetic variation;Specific signature;Phylogenetic analysis

期刊名称:INFECTION GENETICS AND EVOLUTION ( 影响因子:3.342; 五年影响因子:3.188 )

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收录情况: SCI

摘要: The genetic variation and molecular evolution of the V gene of the class II Newcastle disease virus (NDV) isolates with genotypes I-XVIII were determined using bioinformatics. Results indicated that low homology existed in different genotype viruses, whereas high homology often for the same genotypes, exception may be existed within genotypes I, V, VI, and XII. Sequence analysis showed that the genetic variation of V protein was consistent with virus genotype, and specific signatures on the V protein for nine genotypes were identified. Phylogenetic analysis demonstrated that the phylogenetic trees were highly consistent between the V and F genes, with slight discrepancies in the sub-genotypes. Evolutionary rate analyses based on V and F genes revealed the evolution rates varied in genotypes. These data indicate that the genetic variation of V protein is genotype-related and will help in elucidating the molecular evolution of NDV. (C) 2015 Elsevier B.V. All rights reserved.

分类号: R1

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