Mitochondrial genomes of two Babesia taxa from sheep in China as a foundation for population genetic and epidemiological investigations

文献类型： 外文期刊

第一作者： Wang, Tao

作者： Wang, Tao;Guan, Guiquan;Yin, Hong;Wang, Tao;Korhonen, Pasi K.;Koehler, Anson V.;Young, Neil D.;Hall, Ross S.;Gasser, Robin B.;Gasser, Robin B.

作者机构：

关键词： Babesia/babesiosis;Illumina sequencing;Mitochondrial genome;Bioinformatics;Relationships;Systematics

期刊名称：INFECTION GENETICS AND EVOLUTION （ 影响因子：3.342； 五年影响因子：3.188 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Here, we sequenced, assembled and annotated the mitochondrial (mt) genomes of two operational taxonomic units of Babesia from sheep from China using a deep sequencing-coupled approach. Then, we defined and compared the gene order of these mt genomes (similar to 5.8 to 6.2 kb in size), assessed sequence differences in mt genes among Babesia taxa and evaluated genetic relationships among these taxa and related apicomplexans (Theileria) for which mt genomic data sets were available. We also identified mt genetic regions that might be useful as markers for future population genetic and molecular epidemiological studies of Babesia from small ruminants. We propose that the sequencing-bioinformatic approach used here should be applicable to a wide range of protists of veterinary importance. (C) 2016 Published by Elsevier B.V.

分类号： R1

  • 相关文献

[1]The apicoplast genomes of two taxonomic units of Babesia from sheep. Wang, Tao,Guan, Guiquan,Yin, Hong,Wang, Tao,Korhonen, Pasi K.,Koehler, Anson V.,Hall, Ross S.,Young, Neil D.,Gasser, Robin B..

[2]Mitochondrial genomes of Anisakis simplex and Contracaecum osculatum (sensu stricto) - Comparisons with selected nematodes. Mohandas, Namitha,Jabbar, Abdul,Jex, Aaron R.,Gasser, Robin B.,Podolska, Magdalena,Zhu, Xing-Quan,Littlewood, D. Timothy J.. 2014

[3]The complete mitochondrial genome of Ovis ammon darwini (Artiodactyla: Bovidae). Mao, Hongxia,Liu, Hanli,Ma, Guilin,Yang, Qin,Guo, Xian,Lamaocao, Zhong.

[4]Morphological, biological and molecular characteristics of bisexual and parthenogenetic Haemaphysalis longicornis. Chen, Ze,Bu, Fengju,Yang, Xiaohong,Liu, Jingze,Chen, Ze,Yang, Xiaojun. 2012

[5]Genetic variability of the Asian arowana, Scleropages formosus, based on mitochondrial DNA genes. Mu, Xi-dong,Song, Hong-mei,Wang, Xue-jie,Yang, Ye-xin,Luo, Du,Gu, Dang-en,Luo, Jian-ren,Hu, Yin-chang.

[6]Fungal Planet description sheets: 320-370. Hernandez-Restrepo, M.,Boekhout, T.,Groenewald, M.,Lombard, L.,Smith, M. Th.,Groenewald, J. Z.,Crous, P. W.,Wingfield, M. J.,Hernandez-Restrepo, M.,Crous, P. W.,Guarro, J.,Gene, J.,Stchigel, A. M.,Cano-Lira, J. F.,Marin-Felix, Y.,Sandoval-Denis, M.,Guarro, J.,Gene, J.,Stchigel, A. M.,Cano-Lira, J. F.,Giraldo, A.,Marin-Felix, Y.,Sandoval-Denis, M.,Sutton, D. A.,Wiederhold, N. P.,Acharya, K.,Sarkar, J.,Barber, P. A.,Barber, P. A.,Dimitrov, R. A.,Duenas, M.,Martin, M. P.,Telleria, M. T.,Gouliamova, D. E.,Stoilova-Disheval, M. M.,Morozova, O. V.,Alexandrova, A. V.,Kovalenko, A. E.,Popov, E. S.,Morozova, O. V.,Kovalenko, A. E.,Malysheva, E. F.,Popov, E. S.,Alexandrova, A. V.,Wood, A. R.,Antelmi, I.,Armengol, J.,Barnes, I.,Fouriem, A.,van der Merwe, N. A.,Castaneda Ruiz, R. F.,Courtecuisse, Pr. R.,da Silveira, A. L.,de Goes, A.,Firmino, A. C.,Decock, C. A.,Edathodu, J.,Edathodu, J.,Ercole, E.,Vizzini, A.,Furtado, E. L.,Geering, A. D. W.,Khe.

[7]Families of Diaporthales based on morphological and phylogenetic evidence. Senanayake, I. C.,Li, W. J.,Karunarathna, S. C.,Hyde, K. D.,Senanayake, I. C.,Li, W. J.,Karunarathna, S. C.,Hyde, K. D.,Senanayake, I. C.,Perera, R. H.,Li, W. J.,Norphanphoun, C.,Hyde, K. D.,Crous, P. W.,Groenewald, J. Z.,Maharachchikumbura, S. S. N.,Al-Sadi, A. M.,Jeewon, R.,Phillips, A. J. L.,Bhat, J. D.,Bhat, J. D.,Li, Q. R.,Tangthirasunun, N.,Tangthirasunun, N.,Camporesi, E.,Camporesi, E.,Camporesi, E.,Manawasighe, I. S.. 2017

[8]Botryosphaeriaceae: Current status of genera and species. Dissanayake, A. J.,Li, X. H.,Phillips, A. J. L.,Dissanayake, A. J.,Hyde, K. D.. 2016

[9]A polyphasic approach for studying Colletotrichum. Cai, L.,Hyde, K. D.,Hyde, K. D.,Phoulivong, S.,Prihastuti, H.,Taylor, P. W. J.,Weir, B. S.,McKenzie, E. H. C.,Johnston, P. R.,Waller, J. M.,Abang, M. M.,Zhang, J. Z.,Yang, Y. L.,Liu, Z. Y.,Shivas, R. G.. 2009

[10]Endophytic Colletotrichum species from Bletilla ochracea (Orchidaceae), with descriptions of seven new speices. Tao, Gang,Liu, Fang,Gao, Ya-Hui,Cai, Lei,Tao, Gang,Tao, Gang,Liu, Zuo-Yi. 2013

[11]Phialemoniopsis endophytica sp nov., a new species of endophytic fungi from Luffa cylindrica in Henan, China. Su, Lei,Deng, Hui,Niu, Yong-Chun.

[12]Unveiling cryptic species of the bumblebee subgenus Bombus s. str. worldwide with COI barcodes (Hymenoptera: Apidae). Williams, Paul H.,Brown, Mark J. F.,Carolan, James C.,An, Jiandong,Huang, Jiaxing,Goulson, Dave,Dawson, Robert,Aytekin, A. Murat,Best, Lincoln R.,Sheffield, Cory S.,Byvaltsev, Alexandr M.,Cederberg, Bjorn,Monfared, Alireza,Raina, Rifat H.,Schmid-Hempel, Paul,Sima, Peter,Xie, Zenghua. 2012

[13]Fungal Planet description sheets: 281-319. Crous, P. W.,Stalpers, J. A.,Stielow, B.,Groenewald, J. Z.,Wingfield, M. J.,Summerell, B. A.,Summerell, B. A.,Giraldo, A.,Gene, J.,Guarro, J.,Giraldo, A.,Gene, J.,Guarro, J.,Wanasinghe, D. N.,Hyde, K. D.,Wanasinghe, D. N.,Hyde, K. D.,Wanasinghe, D. N.,Hyde, K. D.,Wanasinghe, D. N.,Hyde, K. D.,Thambugala, K. M.,Wanasinghe, D. N.,Hyde, K. D.,Thambugala, K. M.,Camporesi, E.,Camporesi, E.,Camporesi, E.,Jones, E. B. Gareth,Thambugala, K. M.,Malysheva, E. F.,Malysheva, V. F.,Acharya, K.,Dutta, A. K.,Alvarez, J.,Carlavilla, J. R.,Manjon, J. L.,Moreno, G.,Alvarado, P.,Assefa, A.,Barnes, C. W.,Bartlett, J. S.,Holdom, D. G.,Shivas, R. G.,Tan, Y. P.,Blanchette, R. A.,Burgess, T. I.,Coetzee, M. P. A.,Marincowitz, S.,Damm, U.,Decock, C. A.,den Breeyen, A.,Wood, A. R.,Rooney-Latham, S.,Mirabolfathy, M.,Nakashima, C.,Papizadeh, M.,Fazeli, S. A. Shahzadeh,Amoozegar, M. A.,Romberg, M. K.,Stukely, M. J. C.,Swart, W. J.,van der Bank, M.,Groenewald, J. Z..

[14]A new species of Scolelepis (Polychaeta: Spionidae) from sandy beaches in China, with a review of Chinese Scolelepis species. Ji, Weiwei,Li, Xinzheng,Zhou, Jin,Ji, Weiwei.

[15]Fungal Biodiversity Profiles 21-30. Buyck, Bart,Duhem, Bernard,Hofstetter, Valerie,Das, Kanad,Parihar, Arvind,Jayawardena, Ruvishika S.,Niveiro, Nicolas,Michlig, Andrea,Fabian Popoff, Orlando,Andrea Ramirez, Natalia,Niveiro, Nicolas,Michlig, Andrea,Fabian Popoff, Orlando,Andrea Ramirez, Natalia,Lewish, David P.,Pereira, Olinto L.,da Silva, Meiriele,Prasher, Indu B.,Verma, Rajnish K.,Adhikari, Sinchan,Omar Alberto, Edgardo,Bulgakov, Timur S.,Castareda-Ruiz, Rafael F.,Hembrom, Manoj E.,Hyde, Kevin D.,Hyde, Kevin D.,Buyck, Bart,Nuytinck, Jorinde.

[16]Phylogenetic analysis of Plectosphaerella species based on multi-locus DNA sequences and description of P. sinensis sp nov.. Su, Lei,Deng, Hui,Niu, Yong-Chun.

[17]New species and notes of Colletotrichum on daylilies (Hemerocallis spp.). Yang, Youlian,Liu, Zuoyi,Yang, Youlian,Cai, Lei,Hyde, Kevin D..

[18]Two new Pseudohalonectria species on beech cupules (Fagus sylvatica) and a new genus to accommodate P-suthepensis. Perera, Rekhani H.,Ariyawansa, H.,Liu, Zuo-Yi,Perera, Rekhani H.,Hyde, Kevin D.,Perera, Rekhani H.,Hyde, Kevin D.,Maharachchikumbura, Sajeewa S. N.,Al-Sadi, Abdullah M.,Bahkali, Ali H.,Jones, E. B. Gareth,Hyde, Kevin D.,Hyde, Kevin D..

[19]Colletotrichum species on Orchidaceae in southwest China. Yang, Youlian,Liu, Zuoyi,Yang, Youlian,Cai, Lei,Yu, Ziniu,Hyde, Kevin D.,Hyde, Kevin D..

[20]Comparative Analysis of the Complete Chloroplast Genome of Four Endangered Herbals of Notopterygium. Jiao Yang,Li, Zhong-Hu,Ma, Xiong-Feng,Ming Yue,Chuan Niu,Xiong-Feng Ma,Zhong-Hu Li. 2017

作者其他论文 更多>>

微信小程序