Integrated transcriptome, proteome and physiology analysis of Epinephelus coioides after exposure to copper nanoparticles or copper sulfate

文献类型: 外文期刊

第一作者: Wang, Tao

作者: Wang, Tao;Han, Shiqun;Yan, Shaohua;Wang, Tao;Long, Xiaohua;Chen, Xiaoyan;Liu, Yuanrui;Liu, Zhaopu;Yan, Shaohua

作者机构:

关键词: Transcriptome;proteome;copper nanoparticles;Epinephelus coioides;copper sulfate

期刊名称:NANOTOXICOLOGY ( 影响因子:5.913; 五年影响因子:6.612 )

ISSN:

年卷期:

页码:

收录情况: SCI

摘要: Copper nanoparticles (Cu-NPs) are components in numerous commercial products, but little is known about the mechanisms of their toxicity to marine fish. Here, we investigated physiology, transcriptome and proteome in Epinephelus coioides after exposure to Cu as Cu-NPs or copper sulfate (CuSO4). Aggregation, oxidation and dissolution of Cu-NPs occurred after suspension in seawater within 24h. Cu-NPs had similar types of the histology and hematological effects as CuSO4 on E. coioides, but toxicity of Cu-NPs seems more severe than that of CuSO4. Venn diagram analyses revealed 1428 and 2239 genes with significantly altered regulation in, respectively, CuSO4 and Cu-NPs treatments; of these, 911 genes were common to both treatments. A total of 354 and 140 proteins with significantly altered regulation were identified in, respectively, CuSO4 and Cu-NPs treatments; of these, 75 proteins were common to both treatments. A total of 11,417 transcripts and 3210 proteins were assigned to gene ontology terms, clusters of orthologous groups and Kyoto encyclopedia of genes and genomes. Correlation analysis of gene and protein expressions revealed that 21 differentially expressed proteins had their regulation changed in the same direction in both Cu-NPs and CuSO4 treatments. Those genes and proteins could be used as targets for subsequent analysis, regardless of the Cu form. Among those proteins, one of the most notable changes was in proteins related to lipid transport and metabolism. This study provides an enhanced understanding of E. coioides responses to Cu-NPs or CuSO4.

分类号: R3

  • 相关文献

[1]Comparative transcriptome and proteome profiling of two Citrus sinensis cultivars during fruit development and ripening. Liu, Jian-jun,Chen, Ke-ling,Li, Hong-wen,He, Jian,Guan, Bin,He, Li,Wang, Jian-hui,Liu, Jian-jun,Chen, Ke-ling,Li, Hong-wen,He, Jian,Guan, Bin,He, Li,Wang, Jian-hui,Liu, Jian-jun,Chen, Ke-ling,Li, Hong-wen,He, Jian,Guan, Bin,He, Li. 2017

[2]Transcriptomic and proteomic analysis of Locusta migratoria eggs at different embryonic stages: Comparison for diapause and non-diapause regimes. Hao Kun,Wang Jie,Tu Xiong-bing,Zhang Ze-hua,Whitman, Douglas W.. 2017

[3]In-depth proteomic analysis of nacre, prism, and myostracum of Mytilus shell. Liao, Zhi,Bao, Lin-fei,Fan, Mei-hua,Gao, Peng,Wang, Xin-xing,Qin, Chuan-li,Li, Xiao-min.

[4]Comparative analyses of transcriptome and proteome in response to cotton bollworm between a resistant wild soybean and a susceptible soybean cultivar. Wang, Xiaoyi,Lu, Jianhua,Chen, Haifeng,Shan, Zhihui,Shen, Xinjie,Duan, Bingbing,Zhang, Chanjuan,Yang, Zhonglu,Zhang, Xiaojuan,Qiu, Dezhen,Chen, Shuilian,Zhou, Xinan,Jiao, Yongqing,Wang, Xiaoyi,Lu, Jianhua.

[5]Changes of transcriptome and proteome are associated with the enhanced post-anthesis high temperature tolerance induced by pre-anthesis heat priming in wheat. Xin, Caiyun,Wang, Xiao,Cai, Jian,Zhou, Qin,Dai, Tingbo,Cao, Weixing,Jiang, Dong,Liu, Fulai,Xin, Caiyun.

[6]Integrated omics data of two annual ryegrass (Lolium multiflorum L.) genotypes reveals core metabolic processes under drought stress. Pan, Ling,Ma, Xiao,Yang, Zhongfu,Zhang, Xinquan,Meng, Chen,Wang, Jianping,Fan, Xiaomei,Zhou, Meiliang. 2018

[7]Towards systems biological understanding of leaf senescence. Guo, Yongfeng,Guo, Yongfeng.

[8]Effects of dietary copper supplementation on nutrient digestibility, serum biochemical indices, and growth rate of young female mink (Neovison vison). Wu, X. -Z.,Gao, X. -H.,Wu, X. -Z.,Yang, Y.,Liu, H. -T.,Yue, Z. -Y.,Yang, F. -H.,Xing, X.,Yang, F. -H..

[9]Electrocatalytic oxidation of phytohormone salicylic acid at copper nanoparticles-modified gold electrode and its detection in oilseed rape infected with fungal pathogen Sclerotinia sclerotiorum. Wang, Zhan,Xu, Qiao,Yu, Jiu-Hong,Yang, Qin,Zhao, Yuan-Di,Wei, Fang,Liu, Sheng-Yi,Huang, Jun-Yan,Dong, Xu-Yan,Chen, Hong.

[10]Growth, feed intake and immune responses of orange-spotted grouper (Epinephelus coioides) exposed to low infectious doses of ectoparasite (Cryptocaryon irritans). Yin, Fei,Sun, Peng,Shi, Zhao-Hong,Gao, Quan-Xin,Peng, Shi-Ming,Dan, Xue-Ming,Li, An-Xing. 2014

[11]Expression and functional characterization of a gene associated with retinoid-interferon-induced mortality 19 (GRIM-19) from orange-spotted grouper (Epinephelus coioides). Shi, Yan,Zhu, Xinping,Chen, Kunci,Zhao, Zhe,Zhang, Qiya. 2013

[12]Polygenic expression of somatostatin in orange-spotted grouper (Epinephelus coioides): Molecular cloning and distribution of the mRNAs encoding three somatostatin precursors. Ying, Y,Li, WS,Lin, HR. 2005

[13]Ontogenetic Development of Digestive Enzymes in Orange-Spotted Grouper (Epinephelus coioides, Hamilton, 1822) Larvae. Guo, Huayang,Li, Jianzhu,Ma, Zhenhua,Zhang, Jiasong,Zhen, Panlong,Cheng, Dachuan,Guo, Huayang. 2016

[14]Molecular characterization and functional analysis of TRAF6 in orange-spotted grouper (Epinephelus coioides). Li, Yan-Wei,Li, Xia,Xiao, Xi-Xi,Li, An-Xing,Zhao, Fei,Luo, Xiao-Chun,Dan, Xue-Ming.

[15]Interferon regulatory factor-2 in orange-spotted grouper (Epinephelus coioides): Gene, inductive expression pattern and subcellular localization. Shi, Yan,Yin, Jing-Kui,Zhu, Xin-Ping,Chen, Kun-Ci,Pan, De-Bo,Zhao, Zhe,Zhu, Xin-Ping,Gui, Jian-Fang.

[16]Characterization and Functional Analysis of Voltage-Dependent Anion Channel 1 (VDAC1) from Orange-Spotted Grouper (Epinephelus coioides). Shi, Yan,Hong, Xiaoyou,Chen, Kunci,Zhu, Xinping,Zhao, Zhe.

[17]Mass Mortality of Cage-cultured Orange-spotted Grouper Epinephelus coioides Associated with Renal Sphaerosporosis Caused by Sphaerospora epinepheli in South China Sea. Xu, Li-Wen,Feng, Juan,Zhang, Jing-Yong,Wang, Jian-Guo.

[18]A collection of 10,096 indica rice full-length cDNAs reveals highly expressed sequence divergence between Oryza sativa indica and japonica subspecies. Liu, Xiaohui,Lu, Tingting,Yu, Shuliang,Li, Ying,Huang, Yuchen,Huang, Tao,Zhang, Lei,Zhu, Jingjie,Zhao, Qiang,Fan, Danlin,Mu, Jie,Shangguan, Yingying,Feng, Qi,Guan, Jianping,Ying, Kai,Zhang, Yu,Lin, Zhixin,Sun, Zongxiu,Qian, Qian,Lu, Yuping,Han, Bin.

[19]Comparative proteomic analysis reveals the mechanisms governing cotton fiber differentiation and initiation. Kang Liu,Meiling Han,Chaojun Zhang,Liangyu Yao,Jing Sun,Tianzhen Zhang.

[20]iTRAQ-Based Comparative Proteomic Analysis of Seedling Leaves of Two Upland Cotton Genotypes Differing in Salt Tolerance. Wenfang Gong,Feifei Xu,Du, Xiongming,Junling Sun,Zhen Peng,Shoupu He,Zhaoe Pan,Xiongming Du. 2017

作者其他论文 更多>>