Chromosome-level genome assembly of Z strain European corn borer Ostrinia nubilalis (Lepidoptera: Crambidae)
文献类型: 外文期刊
第一作者: Ding, Xinhua
作者: Ding, Xinhua;Wang, Xiaowu;Fu, Kaiyun;Jia, Zunzun;Rouzi, Aerziguli;Ahmat, Tursun;Guo, Wenchao;Zhang, Yue;Wang, Zhihui
作者机构:
期刊名称:SCIENTIFIC DATA ( 影响因子:6.9; 五年影响因子:8.7 )
ISSN:
年卷期: 2025 年 12 卷 1 期
页码:
收录情况: SCI
摘要: European corn borer Ostrinia nubilalis (H & uuml;bner) is the most important pest of maize around world, and an ideal model for the sympatric host races, evolutionary and speciation research. In this study, we assembled a chromosome-level genome of Z strain O. nubilalis by the integrated Illumina short reads, PacBio Revio long reads, and Hi-C sequencing data. The chromosome-level genome was 480.04 Mb in total length with a contig N50 length of 16.51 Mb, which 98.59% genome anchored into 31 chromosomes. For the annotation, 1,046,695 repeat sequences in length of 212.07 Mb, 1,550 non-coding RNAs (including 1,208 tRNAs, 179 rRNAs, 62 miRNAs, 81 snRNAs, and 20 snoRNAs), and 17,145 protein-coding genes were identified. And 100% genes were functional annotated by SwissProt, NR, eggNOG, Go, and KEGG database. This genome provides a valuable genomics resource to elucidate the host plant adaptation, thermal adaptation, diapause induction, Bacillus thuringiensis toxin resistance, sexual communication, sympatric host races, and speciation process of O. nubilalis.
分类号:
- 相关文献
作者其他论文 更多>>
-
A comprehensive review of starch-based technology for encapsulation of flavor: From methods, materials, and release mechanism to applications
作者:Shan, Yimeng;Li, Jiaxin;Nie, Mengzi;Li, Dezhi;Zhang, Yue;Li, Yang;Wang, Lili;Liu, Liya;Wang, Fengzhong;Tong, Li-Tao;Tong, Li-Tao
关键词:Encapsulation techniques; Flavor; Starch-based materials; Inclusion complex; Release mechanisms; Industry applications
-
Network pharmacology and phytochemical composition combined with validation in vivo and in vitro reveal the mechanism of platycodonis radix ameliorating PM2.5-induced acute lung injury
作者:Han, Xianlei;Zhang, Yue;Zhang, Fan;Wang, Nan;Li, Xiumei;Meng, Yanli;Huo, Jinhai;Wang, Weiming;Chen, Mian;Liu, Fei
关键词:Platycodonis radix; Acute lung injury; Network pharmacology; Molecular docking; PM2.5
-
Estimating stomatal conductance of citrus orchard based on UAV multi-modal information in Southwest China
作者:Liu, Quanshan;Wu, Zongjun;Cui, Ningbo;Zheng, Shunsheng;Jiang, Shouzheng;Wang, Zhihui;Zhao, Lu;Liu, Quanshan;Wu, Zongjun;Cui, Ningbo;Zheng, Shunsheng;Jiang, Shouzheng;Wang, Zhihui;Zhao, Lu;Gong, Daozhi;Wang, Yaosheng;Wei, Renjuan
关键词:Stomatal conductance (Gs); UAV multimodal information; Soil moisture content (SMC); Kernel extreme learning machine (KELM); Black-winged kite algorithm (BKA); Black-winged kite algorithm (BKA)
-
Genome-wide analysis of the laccase gene family in Arachis hypogaea and functional characterization of AhLAC63 involved in lignin biosynthesis and abiotic stress
作者:Yao, Ruonan;Liu, Yue;Ouyang, Lei;Yan, Liying;Chen, Yuning;Huai, Dongxin;Wang, Zhihui;Kang, Yanping;Wang, Qianqian;Jiang, Huifang;Lei, Yong;Liao, Boshou;Wang, Xin;Yao, Ruonan;Ouyang, Lei;He, Dongli
关键词:Peanut; Laccase; Lignin; Abiotic stress; Phenylpropanoid
-
Zn2+inhibits PEDV replication by inducing autophagy through the Akt-mTOR pathway
作者:Wang, Caiying;Zhang, Yue;Liu, Guangliang;Wang, Caiying;Yang, Shanshan;Savelkoul, Huub F. J.;Jansen, Christine A.
关键词:Zinc; PEDV; Autophagy; VPS34; Akt-mTOR
-
An Insight into Differentially Expressed Genes and MicroRNAs in the Pituitary Glands of the Two Estrous Phases of Sheep with Different FecB Genotypes
作者:Zhang, Yue;He, Xiaoyun;Di, Ran;Wang, Xiangyu;Chu, Mingxing
关键词:
FecB mutation; small tail han sheep; miRNA-seq; pituitary gland -
Rapid and Sensitive On-Site Nucleic Acid Detection of Three Main Fusarium Pathogens of Maize Stalk Rot Based on RPA-CRISPR/Cas12a
作者:Jiang, Fan;Jiang, Fan;Ding, Xinhua;Wang, Xiaowu;Fu, Kaiyun;Jia, Zunzun;Guo, Wenchao;Jiang, Fan;Liang, Liang
关键词:CRISPR/Cas12a;
Fusarium graminearum ;Fusarium proliferatum ;Fusarium verticillioides ; recombinase polymerase amplification (RPA)