Construction of Agropyron Gaertn. genetic linkage maps using a wheat 660K SNP array reveals a homoeologous relationship with the wheat genome

文献类型： 外文期刊

第一作者： Zhou, Shenghui

作者： Zhou, Shenghui;Zhang, Jinpeng;Liu, Weihua;Lu, Yuqing;Yang, Xinming;Li, Xiuquan;Jia, Jizeng;Liu, Xu;Li, Lihui;Che, Yonghe

作者机构：

关键词： wheat;wild relatives;SNP array;genetic linkage maps;homoeologous relationship;derivatives

期刊名称：PLANT BIOTECHNOLOGY JOURNAL （ 影响因子：9.803； 五年影响因子：9.555 ）

ISSN： 1467-7644

年卷期： 2018 年 16 卷 3 期

页码：

收录情况： SCI

摘要： Agropyron Gaertn. (P genome) is a wild relative of wheat that harbours many genetic variations that could be used to increase the genetic diversity of wheat. To agronomically transfer important genes from the P genome to a wheat chromosome by induced homoeologous pairing and recombination, it is necessary to determine the chromosomal relationships between Agropyron and wheat. Here, we report using the wheat 660K single nucleotide polymorphism (SNP) array to genotype a segregating Agropyron F-1 population derived from an interspecific cross between two cross-pollinated diploid collections 'Z1842' [A.cristatum (L.) Beauv.] (male parent) and 'Z2098' [A.mongolicum Keng] (female parent) and 35 wheat-A. cristatum addition/substitution lines. Genetic linkage maps were constructed using 913 SNP markers distributed among seven linkage groups spanning 839.7 cM. The average distance between adjacent markers was 1.8 cM. The maps identified the homoeologous relationship between the P genome and wheat and revealed that the P and wheat genomes are collinear and relatively conserved. In addition, obvious rearrangements and introgression spread were observed throughout the P genome compared with the wheat genome. Combined with genotyping data, the complete set of wheat-A. cristatum addition/substitution lines was characterized according to their homoeologous relationships. In this study, the homoeologous relationship between the P genome and wheat was identified using genetic linkage maps, and the detection mean for wheat-A. cristatum introgressions might significantly accelerate the introgression of genetic variation from Agropyron into wheat for exploitation in wheat improvement programmes.

分类号：

  • 相关文献

[1]RNA-Seq Analysis Provides the First Insights into the Phylogenetic Relationship and Interspecific Variation between Agropyron cristatum and Wheat. Zhou, Shenghui,Yan, Baiqiang,Li, Fei,Zhang, Jinpeng,Zhang, Jing,Ma, Huihui,Liu, Weihua,Lu, Yuqing,Yang, Xinming,Li, Xiuquan,Liu, Xu,Li, Lihui. 2017

[2]Discovery, evaluation and distribution of haplotypes of the wheat Ppd-D1 gene. Guo, Zhiai,Song, Yanxia,Zhou, Ronghua,Jia, Jizeng,Guo, Zhiai,Ren, Zhenglong.

[3]Solanesol: a review of its resources, derivatives, bioactivities, medicinal applications, and biosynthesis. Yan, Ning,Liu, Yanhua,Gong, Daping,Du, Yongmei,Zhang, Huaibao,Zhang, Zhongfeng. 2015

[4]Development and evaluation of the first high-throughput SNP array for common carp (Cyprinus carpio). Xu, Jian,Zhao, Zixia,Li, Jiongtang,Jiang, Yanliang,Zhang, Yan,Li, Qiang,Zhu, Yuanyuan,Liu, Yuanyuan,Xu, Peng,Sun, Xiaowen,Zhang, Xiaofeng,Zheng, Xianhu,Kuang, Youyi,Sun, Xiaowen,Feng, Jianxin,Li, Chuangju,Yu, Juhua,Xu, Peng. 2014

[5]GELS MIMICKING ANTIBODIES IN THEIR SELECTIVE RECOGNITION OF PROTEINS. Hjerten, S,Liao, JL,Nakazato, K,Wang, Y,Zamaratskaia, G,Zhang, HX.

[6]Characterizing the population structure and genetic diversity of maize breeding germplasm in Southwest China using genome-wide SNP markers. Zhang, Hua,Li, Lujiang,Lan, Hai,Ren, Zhiyong,Liu, Dan,Wu, Ling,Liu, Hailan,Pan, Guangtang,Gao, Shibin,Zhang, Xiao,Li, Lujiang,Lan, Hai,Ren, Zhiyong,Liu, Dan,Wu, Ling,Liu, Hailan,Pan, Guangtang,Gao, Shibin,Jaqueth, Jennifer,Li, Bailin,Zhang, Hua. 2016

[7]Development of a sensitive monoclonal antibody-based enzyme-linked immunosorbent assay for the antimalaria active ingredient artemisinin in the Chinese herb Artemisia annua L.. He, Su-Ping,Tan, Gui-Yu,Tan, Wei-Ming,Nan, Tie-Gui,Wang, Bao-Min,Li, Zhao-Hu,Li, Gang,Li, Qing X..

[8]Study on the Genetic Relationship of Panax Notoginseng and Its Wild Relatives Based on Fourier Translation Infrared Spectroscopy. Li Yun,Zhang Jin-yu,Xu Fu-rong,Li Yun,Wang Yuan-zhong,Yang Wei-ze,Yang Shao-bing,Zhang Jin-yu. 2016

[9]Genetic diversity and phylogeny of tea plant (Camellia sinensis) and its related species and varieties in the section Thea genus Camellia determined by randomly amplified polymorphic DNA analysis. Chen, L,Yamaguchi, S.

[10]Heat Priming Induces Trans-generational Tolerance to High Temperature Stress in Wheat. Wang, Xiao,Xin, Caiyun,Cai, Jian,Zhou, Qin,Dai, Tingbo,Cao, Weixing,Jiang, Dong,Xin, Caiyun. 2016

[11]Distribution Characteristics of Soil Cadmium in Different Textured Paddy Soil Profiles and Its Relevance with Cadmium Uptake by Crops. Wang Zheng-yin,Qin Yu-sheng,Zhan Shao-jun,Yu Hua,Tu Shi-hua. 2013

[12]Molecular cloning, functional verification, and evolution of TmPm3, the powdery mildew resistance gene of Triticum monococcum L.. Zhao, C. Z.,Li, Y. H.,Dong, H. T.,Geng, M. M.,Liu, W. H.,Li, F.,Ni, Z. F.,Xie, C. J.,Sun, Q. X.,Zhao, C. Z.,Dong, H. T.,Geng, M. M.,Liu, W. H.,Li, F.,Ni, Z. F.,Xie, C. J.,Sun, Q. X.,Zhao, C. Z.,Wang, X. J.. 2016

[13]Wheat Optimized Fertilization of High Yield Field with Returning Whole Stalks into the Soil in Huang-huai-hai Plain. Sui, Xue-Yan,Wang, Meng,Wang, Yong,Guo, Hong-Hai,Li, Zhan,Zhang, Xiao-Dong. 2016

[14]Effects of Cadmium Stress on Alternative Oxidase and Photosystem II in Three Wheat Cultivars. Xu, Fei,Zhang, Zhong-Wei,Chen, Yang-Er,Wang, Xiao,Shang, Jing,Lin, Hong-Hui,Duan, Yong-Ping,Tu, Shi-Hua,Feng, Wen-Qiang. 2010

[15]Haynaldia villosa NAM-V1 is linked with the powdery mildew resistance gene Pm21 and contributes to increasing grain protein content in wheat. Zhao, Chuanzhi,Lv, Xindi,Li, Yinghui,Li, Feng,Geng, Miaomiao,Mi, Yangyang,Ni, Zhongfu,Xie, Chaojie,Sun, Qixin,Zhao, Chuanzhi,Lv, Xindi,Li, Yinghui,Li, Feng,Geng, Miaomiao,Mi, Yangyang,Ni, Zhongfu,Xie, Chaojie,Sun, Qixin,Zhao, Chuanzhi. 2016

[16]Assessment of Land Suitability Potentials for Selecting Winter Wheat Cultivation Areas in Beijing, China, Using RS and GIS. Wang Da-cheng,Wang Ji-hua,Wang Da-cheng,Li Cun-jun,Song Xiao-yu,Wang Ji-hua,Yang Xiao-dong,Huang Wen-jiang,Wang Jun-ying,Zhou Ji-hong. 2011

[17]Dissipation and Residues of Dichlorprop-P and Bentazone in Wheat-Field Ecosystem. Feng, Xiaoxiao,Pan, Lixiang,Zhang, Hongyan,Yu, Jianlei,Song, Guochun. 2016

[18]Competitive interaction in a jujube tree/wheat agroforestry system in northwest China's Xinjiang Province. Zhang, W.,Wang, B. J.,Gan, Y. W.,Duan, Z. P.,Hao, X. D.,Lv, X.,Li, L. H.,Xu, W. L.. 2017

[19]Cuticular Wax Accumulation Is Associated with Drought Tolerance in Wheat Near-Isogenic Lines. Guo, Jun,Yu, Xiaocong,Li, Haosheng,Cheng, Dungong,Liu, Aifeng,Liu, Jianjun,Liu, Cheng,Song, Jianmin,Guo, Jun,Yu, Xiaocong,Li, Haosheng,Cheng, Dungong,Liu, Aifeng,Liu, Jianjun,Liu, Cheng,Song, Jianmin,Xu, Wen,Shen, Hao,Zhao, Shijie. 2016

[20]Preliminary Study on the Physiological Characteristics of Transgenic Wheat with Maize C-4-pepc Gene in Field Conditions. Han, L. L.,Han, L. L.,Xu, W. G.,Hu, L.,Li, Y.,Qi, X. L.,Zhang, J. H.,Zhang, H. F.,Wang, Y. X.. 2014

作者其他论文 更多>>

微信小程序