Correlation analysis between single nucleotide polymorphism of interleukin-1 beta gene and interleukin-1 concentration in three chicken breeds

文献类型： 外文期刊

第一作者： Liu Xiangping

作者： Liu Xiangping;Wang Cunbo;Chang Guobin;Wang Kehua;Chen Guohong;Dou Taocun;Qu Liang;Ma Teng;Chen Rong

作者机构：

关键词： Chicken;Interleukin-1;Interleukin-1 beta gene;SNP

期刊名称：INDIAN JOURNAL OF ANIMAL SCIENCES （ 影响因子：0.316； 五年影响因子：0.366 ）

ISSN： 0367-8318

年卷期： 2013 年 83 卷 4 期

页码：

收录情况： SCI

摘要： This paper aims to detect single nucleotide polymorphism (SNP) of interleukin-1 beta (IL-1 beta) gene of chicken and find genetic marker of IL-1 concentration traits. SNPs of IL-1 beta gene and IL-1 concentration in blood serum in Rugao (RG), Wenchang (WC), and Anka Chicken (AK) were detected by SSCP-PCR and ELISA, respectively. The results showed that IL-1 concentration in blood serum of AK was extremely significantly higher than that of RG and WC. Four mutations were found in all 3 breeds, G476A, T482C, C1215T and T1507C. The genotype distribution of RG chicken at site nt476 was extremely significantly different from WC and AK, whereas there was no significant difference between WC and AK. Significant correlations were found between C1215T and IL-1 concentration in 3 chickens breeds, showing that IL-1 concentration of TT genotype chicken was significantly higher than that of CC. The results demonstrated that the genotype distributions at SNP sites presented significant difference among three breeds, and the site nt1215 could be a genetic marker of IL-1 concentration traits in RG.

分类号：

  • 相关文献

[1]Identification and Analysis of a Functional SNP 1196C > A in 3 ' UTR of Chicken IGFBP2 Gene. Yu Ying-Ying,Qiao Shu-Pei,Sun Ying-Ning,Song He,Zhang Xiao-Fei,Yan Xiao-Hong,Li Hui,Wang Ning,Yu Ying-Ying,Qiao Shu-Pei,Sun Ying-Ning,Song He,Zhang Xiao-Fei,Yan Xiao-Hong,Li Hui,Wang Ning,Yu Ying-Ying,Qiao Shu-Pei,Sun Ying-Ning,Song He,Zhang Xiao-Fei,Yan Xiao-Hong,Li Hui,Wang Ning,Sun Ying-Ning. 2014

[2]Polymorphism in NPY and IGF-I genes associate with reproductive traits in Wenchang chicken. Li, H. F.,Zhu, W. Q.,Chen, K. W.,Tang, Q. P.,Gao, Y. S.,Song, W. T.,Xu, H. L.,Wu, X.,Xu, H. L.. 2009

[3]Whole genomic prediction of growth and carcass traits in a Chinese quality chicken population. Zhang, Z.,Xu, Z. -Q.,Luo, Y. -Y.,Zhang, H. -B.,Gao, N.,He, J. -L.,Zhang, D. -X.,Li, J. -Q.,Zhang, X. -Q.,Zhang, Z.,Xu, Z. -Q.,Luo, Y. -Y.,Zhang, H. -B.,Gao, N.,He, J. -L.,Zhang, D. -X.,Li, J. -Q.,Zhang, X. -Q.,Xu, Z. -Q.,Ji, C. -L.,Zhang, D. -X.. 2017

[4]Identification of SNPs of the L-BABP and L-FABP and their Association with Growth and Body Composition Traits in Chicken. Zhao, Yufang,Rong, Enguang,Wang, Shouzhi,Zhang, Hui,Leng, Li,Wang, Yuxiang,Wang, Qigui,Li, Hui,Zhao, Yufang,Rong, Enguang,Wang, Shouzhi,Zhang, Hui,Leng, Li,Wang, Yuxiang,Wang, Qigui,Li, Hui,Zhao, Yufang,Rong, Enguang,Wang, Shouzhi,Zhang, Hui,Leng, Li,Wang, Yuxiang,Li, Hui,Wang, Qigui.

[5]NHE1 gene associated with avian leukosis virus subgroup J infection in chicken. Chen, Biao,Pan, Weiling,Zhang, Liangyu,Liu, Jing,Ouyang, Hongjia,Nie, Qinghua,Zhang, Xiquan,Chen, Biao,Pan, Weiling,Zhang, Liangyu,Liu, Jing,Ouyang, Hongjia,Nie, Qinghua,Zhang, Xiquan,Chen, Biao,Pan, Weiling,Zhang, Liangyu,Liu, Jing,Ouyang, Hongjia,Nie, Qinghua,Zhang, Xiquan.

[6]Single nucleotide polymorphism screening, molecular characterization, and evolutionary aspects of chicken Piwi genes. Wang, H. Z.,Ma, T.,Chang, G. B.,Wan, F.,Lu, L.,Xu, L.,Chen, J.,Chen, G. H.,Liu, X. P.. 2015

[7]Correlation Analysis Between Single Nucleotide Polymorphisms in Exon 2 of ADSL Gene and Inosine Monophosphate Acid Content in Chicken. Chen, G. H.,Wu, X. S.,Bao, W. B.,Shu, J. T.,Xu, Q.,Zhang, X. Y.,Han, W.. 2009

[8]Chicken Polymorphism at Pre-MicroRNAs Inferred from SNP Data. Zhang, Chuan-sheng,Geng, Li-ying,Zhang, Jin,Zhu, Wen-jin,Du, Li-xin. 2010

[9]Correlation analysis between single nucleotide polymorphisms in ADSL gene and IMP content in chicken. Bao, W. B.,Shu, J. T.,Musa, H. H.,Chen, G. H.. 2009

[10]The relationship between the variants of the bovine MBL2 gene and milk production traits, mastitis, serum MBL-C levels and complement activity. Wang, Xinju,Ju, Zhihua,Huang, Jinming,Hou, Minghai,Zhou, Lei,Qi, Chao,Zhang, Yan,Gao, Qing,Pan, Qing,Zhong, Jifeng,Wang, Changfa,Wang, Xinju,Li, Guorong. 2012

[11]Novel single nucleotide polymorphisms (SNPs) of the bovine STAT4 gene and their associations with production traits in Chinese Holstein cattle. Zhang, Fenfen,Shi, Fangxiong,Zhang, Fenfen,Huang, Jinming,Li, Qiuling,Ju, Zhihua,Li, Jiangbin,Zhong, Jifeng,Wang, Changfa. 2010

[12]Three novel single-nucleotide polymorphisms of complement component 4 gene (C4A) in Chinese Holstein cattle and their associations with milk performance traits and CH50. Yang, Yue,Li, Qiuling,Ju, Zhihua,Huang, Jinming,Zhou, Lei,Li, Rongling,Li, Jianbin,Zhong, Jifeng,Wang, Changfa,Yang, Yue,Shi, Fangxiong.

[13]Regional association analysis-based fine mapping of three clustered QTL for verticillium wilt resistance in cotton (G. hirsutum. L). Yunlei Zhao,Wang, Hongmei,Hongmei Wang,Wei Chen,Pei Zhao,Haiyan Gong,Xiaohui Sang,Yanli Cui. 2017

[14]Single nucleotide polymorphism scanning and expression of the FRZB gene in pig populations. Wang, Zhixiu,Zhang, Bo,Yang, Yuzeng,Ban, Dongmei,Zhang, Hao,Li, Qinggang,Lu, Yunfeng. 2014

[15]GPOPSIM: a simulation tool for whole-genome genetic data. Zhang, Zhe,Li, Jiaqi,Li, Xiujin,Ding, Xiangdong,Zhang, Qin. 2015

[16]Comparative Transcriptomic Analysis Reveals a Series of Single Nucleotide Polymorphism between Redand White-fleshed Loquats (Eriobotrya japonica). Li, Jing,Chen, Dong,Xie, Hongjiang,Tu, Meiyan,Jia, Liu,Jiang, Guoliang,Sun, Shuxia,Li, Jing,Chen, Dong,Xie, Hongjiang,Tu, Meiyan,Jia, Liu,Jiang, Guoliang. 2017

[17]A genetic linkage map and comparative genome analysis of common carp (Cyprinus carpio L.) using microsatellites and SNPs. Zheng, Xianhu,Kuang, Youyi,Zhang, Xiaofeng,Lu, Cuiyun,Cao, Dingchen,Li, Chao,Sun, Xiaowen,Zheng, Xianhu. 2011

[18]Dissection of Recombination Attributes for Multiple Maize Populations Using a Common SNP Assay. Guan, Haiying,Guan, Haiying,Guan, Haiying,Ali, Farhan,Pan, Qingchun. 2017

[19]Identification of Sesame Genomic Variations from Genome Comparison of Landrace and Variety. Wei, Xin,Zhu, Xiaodong,Yu, Jingyin,Wang, Linhai,Zhang, Yanxin,Li, Donghua,Zhou, Rong,Zhang, Xiurong. 2016

[20]Identification of a new stripe rust resistance gene in Chinese winter wheat Zhongmai 175. Lu Jia-ling,Chen Can,Liu Peng,He Zhong-hu,Xia Xian-chun,Chen Can,He Zhong-hu. 2016

作者其他论文 更多>>

微信小程序