Development of SSR markers for typing cultivars in the mushroom Auricularia auricula-judae

文献类型： 外文期刊

第一作者： Zhang, Rui Ying

作者： Zhang, Rui Ying;Gu, Jin Gang;Hu, Qing Xiu;Zuo, Xue Mei;Zhang, Rui Ying;Gu, Jin Gang;Hu, Qing Xiu;Zuo, Xue Mei;Hu, Dan Dan;Wang, He Xiang;Wang, He Xiang

作者机构：

关键词： Auricularia auricula-judae;Mushroom;Simple sequence repeat (SSR);Polymorphism

期刊名称：MYCOLOGICAL PROGRESS （ 影响因子：2.847； 五年影响因子：2.577 ）

ISSN： 1617-416X

年卷期： 2012 年 11 卷 2 期

页码：

收录情况： SCI

摘要： Auricularia auricula-judae, also known as black wood ear, is one of the most popular edible mushrooms in China. But the confusion about cultivars has limited the development of A. auricula-judae production. In this article, 17 polymorphic SSR markers were cloned and used to differentiate the cultivars of A. auricula-judae. The polymorphism information content (PIC) of these SSR ranged from 0.10 to 0.84, while the average was 0.47. The number of alleles detected for each locus was 2-11, with an average of 4.7 alleles per locus. The dendrogram, based on 17 SSR markers by UPGMA clustering, could differentiate the 16 A. auricula-judae cultivars in this study. In fact, the 16 cultivars analyzed in this study could be efficiently differentiated using a combination of three polymorphic SSR loci with high PIC. The total of 17 polymorphic SSR loci could also be amplified correctly in the A. polytricha strains surveyed. This is the first report on the development of SSR markers in the genus Auricularia.

分类号：

  • 相关文献

[1]Development and characterization of simple sequence repeat (SSR) markers for the mushroom Flammulina velutipes. Zhang, Ruiying,Wang, Hexiang,Zhang, Ruiying,Wang, Hexiang,Zhang, Ruiying,Zhang, Jinxia,Zuo, Xuemei,Jiang, Ruibo,Hu, Dandan,Ng, Tzi Bun.

[2]GENETIC DIVERSITY OF COLORED COTTON ANALYZED BY SIMPLE SEQUENCE REPEAT MARKERS. Dong-Lei Sun,Zhi-Ying Ma,Dong-Lei Sun,Jun-Ling Sun,Yin-Hua Jia,Xiong-Ming Du.

[3]Detection of Fusarium head blight resistance QTL in a wheat population using bulked segregant analysis. Shen, X,Zhou, M,Lu, W,Ohm, H. 2003

[4]Novel pleiotropic loci controlling panicle architecture across environments in japonica rice (Oryza sativa L.). Guo, Yuan,Hong, Delin,Guo, Yuan. 2010

[5]Diversity, population structure, and evolution of local peach cultivars in China identified by simple sequence repeats. Shen, Z. J.,Zhang, Z.,Shen, Z. J.,Ma, R. J.,Cai, Z. X.,Yu, M. L.. 2015

[6]Development of 107 SSR markers from whole genome shotgun sequences of Chinese bayberry (Myrica rubra) and their application in seedling identification. Jia, Hui-min,Shen, Yu-tong,Jiao, Yun,Dong, Xiao,Jia, Hui-juan,Du, Fang,Gao, Zhong-shan,Wang, Guo-yun,Liang, Sen-miao,Zhou, Chao-chao,Mao, Wei-hua. 2014

[7]Fine mapping of a pistilloid-stamen (PS) gene on the short arm of chromosome 1 in rice. Li, Yunfeng,Yang, Zhenglin,Zhong, Bingqiang,Xie, Rong,Ren, Maozhi,Luo, Da,He, Guanghua. 2006

[8]Identification and mapping stripe rust resistance gene YrLM168a using extreme individuals and recessive phenotype class in a complicate genetic background. Chen, Guoyue,Wei, Yuming,Liu, Yaxi,Jiang, Qiantao,Lan, Xiujin,Dai, Shoufen,Zheng, Youliang,Feng, Junyan,Zhang, Min,Li, Wei,Pu, Zhien.

[9]Exploitation of Malus EST-SSRs and the utility in evaluation of genetic diversity in Malus and Pyrus. Yao, Lihua,Zheng, Xiaoyan,Cai, Danying,Teng, Yuanwen,Yao, Lihua,Zheng, Xiaoyan,Cai, Danying,Teng, Yuanwen,Gao, Yuan,Wang, Kun,Cao, Yufen.

[10]Exploiting EST databases for the development and characterization of EST-SSR markers in blueberry (Vaccinium) and their cross-species transferability in Vaccinium spp. Liu, You-chun,Liu, Shuo,Wei, Yong-xiang,Liu, Cheng,Yang, Yan-min,Liu, Wei-sheng,Liu, You-chun,Tao, Cheng-guang,Liu, Dong-cheng,Tao, Cheng-guang.

[11]Simple sequence repeat markers for botanical varieties of cultivated peanut (Arachis hypogaea L.). Meng, RH,Gao, H,Guo, BZ,Gao, GQ,Newman, M,Pittman, RN,Prakash, CS. 2005

[12]2n egg formation in Populus x euramericana (Dode) Guinier. Zhang, Jinfeng,Li, Bailian,Li, Bailian,Xi, Xiaojun,Li, Dan,Xu, Wenting,Guo, Liqin,Zhang, Jinfeng,Li, Bailian,Xi, Xiaojun,Li, Dan,Xu, Wenting,Guo, Liqin,Zhang, Jinfeng,Li, Bailian,Xi, Xiaojun,Li, Dan,Xu, Wenting,Guo, Liqin,Zhang, Jinfeng,Li, Bailian,Xi, Xiaojun. 2012

[13]Genetic diversity of cultivated and wild Ussurian Pear (Pyrus ussuriensis Maxim.) in China evaluated with M13-tailed SSR markers. Cao, Yufen,Tian, Luming,Gao, Yuan,Liu, Fengzhi. 2012

[14]Fine mapping of E-kp-1, a locus associated with silkworm (Bombyx mori) proleg development. Xiang, H.,Li, M.,Yang, F.,Guo, Q.,Zhan, S.,Lin, H.,Miao, X.,Huang, Y.,Li, M.. 2008

[15]Developing new SSR markers from ESTs of pea (Pisum sativum L.). Gong, Ya-ming,Xu, Sheng-chun,Hu, Qi-zan,Zhang, Gu-wen,Ding, Ju,Mao, Wei-hua,Li, Ya-dan. 2010

[16]Determination of the genetic diversity of vegetable soybean [Glycine max (L.) Merr.] using EST-SSR markers. Zhang, Gu-wen,Xu, Sheng-chun,Hu, Qi-zan,Gong, Ya-ming,Mao, Wei-hua. 2013

[17]Identification of Chinese white pear cultivars using SSR markers. Tian, Luming,Gao, Yuan,Cao, Yufen,Liu, Fengzhi,Yang, Jun. 2012

[18]Identification of genetic loci associated with crude protein and mineral concentrations in alfalfa (Medicago sativa) using association mapping. Jia, Congjun,Chen, Min,Liu, Xiqiang,Gong, Pan,Wang, Xuemin,Gao, Hongwen,Wang, Zan,Wu, Xinming,Wang, Yunqi,Xu, Qingfang. 2017

[19]Genetic diversity among silkworm (Bombyx mori L., Lep., Bombycidae) germplasms revealed by microsatellites. Li, MW,Shen, L,Xu, AY,Miao, XX,Hou, CX,Sun, PJ,Zhang, YH,Huang, YP. 2005

[20]Development and characterization of expressed sequence tag-derived simple sequence repeat markers in tropical forage legume Stylosanthes guianensis (Aubl.) Sw.. Bai, Changjun.

作者其他论文 更多>>

微信小程序