Molecular cloning, expression and characterization of bovine UQCC and its association with body measurement traits

文献类型: 外文期刊

第一作者: Liu, Yongfeng

作者: Liu, Yongfeng;Zan, Linsen;Zhao, Shuanping;Liu, Yongfeng;Huang, Honggang;Li, Yong;Tang, Zhonglin;Yang, Shulin;Li, Kui;Zan, Linsen

作者机构:

关键词: association analysis;body measurement;cattle;genomic structure;SNP polymorphism;Ubiquinol-cytochrome c reductase complex chaperone (UQCC)

期刊名称:MOLECULES AND CELLS ( 影响因子:5.034; 五年影响因子:4.932 )

ISSN: 1016-8478

年卷期: 2010 年 30 卷 5 期

页码:

收录情况: SCI

摘要: Ubiquinol-cytochrome c reductase complex chaperone (UQCC) involved in the development and maintenance of bone and cartilage is an important candidate gene for body measurement traits selection through marker-assisted selection (MAS). The expression of UQCC is upregulated in many human and animal models of height as well as other stature indexes. We have cloned the cDNA sequence coding UQCC gene in bovine. Genomic structural analysis indicated that bovine UQCC shares a high similarity with human UQCC. Furthermore, Real-Time PCR analysis show that the expression of bovine UQCC is remarkably different in diverse tissues, including high level expression in the spleen, heart and windpipe, and relatively low expression in other tissues. We also analyzed allele frequencies in different cattle breeds and an association study on the selected SNPs. SNP DraI A2691T in intron 1 and SNP Bsh1236I A3150G in intron 8 are significantly associated with Body Length (BL), Rump Length (RL), Chest Depth (CD) and Pin Bone Width (PBW). For the A2691T SNP marker, there are significant effects on the RL (p = 0.0001), CD (p = 0.0059) and PBW (p < 0.0001) in 679 individuals; with A3150G SNP marker, there are significant effects on the BL (p = 0.0047) and CD (p = 0.0454. Regarding association analysis of combination of the two SNPs, there are significant effects on the BL (p = 0.0215), CD (p = 0.0282) and PBW (p = 0.0329) in the total population. The results suggest that the UQCC gene is a candidate gene of body measurement traits in bovine reproduction and breeding, and provide data for establishing of an animal model using cattle to study big animal body type.

分类号:

  • 相关文献

[1]Molecular characterization, polymorphism of bovine ZBTB38 gene and association with body measurement traits in native Chinese cattle breeds. Liu, Yongfeng,Zan, Linsen,Zhao, Shuanping,Xin, Yaping,Li, Linqiang,Liu, Yongfeng,Cui, Wentao,Tang, Zhonglin,Li, Kui,Zan, Linsen.

[2]Molecular cloning, characterization and association analysis of the promoter region of the bovine CDK6 gene. Liu, Y. F.,Zan, L. S.,Xin, Y. P.,Jiao, Y.,Cui, W. T.,Li, K.,Liu, Y. F.. 2011

[3]A novel polymorphism of GDF5 gene and its association with body measurement traits in Bos taurus and Bos indicus breeds. Liu, Yong Feng,Zan, Lin Sen,Zhao, Shuan Ping,Xin, Ya Ping,Lin, Qing,Tian, Wan Qiang,Li, Kui,Wang, Zhi Wei,Zan, Lin Sen.

[4]Molecular characterization, expression pattern, polymorphism and association analysis of bovine ADAMTSL3 gene. Liu, Yongfeng,Zan, Linsen,Zhao, Shuanping,Xin, Yaping,Jiao, Yang,Zhao, Shuanping,Li, Kui,Liu, Yongfeng.

[5]Association analysis of thyroglobulin gene variants with carcass and meat quality traits in beef cattle. Xu, Shang-Zhong,Gan, Qian-Fu,Hou, Guan-Yu,Xu, Shang-Zhong. 2008

[6]Characterization of the porcine p65 subunit of NF-kappa B and its association with virus antibody levels. Cao, Jiyue,Li, Hegang,Ma, Guojian,Gui, Duan,Zhao, Shuanping,Wang, Pan,Ruan, Jinxue,Yang, Shulin,Li, Kui,He, Kongwang,Wang, Xuemin. 2011

[7]Characterization of porcine MMP-2 and its association with immune traits. Huang, Honggang,Zhao, Weimin,Tang, Zhonglin,Yang, Shulin,Cui, Wentao,Mu, Yulian,Chu, Mingxing,Li, Kui,Zhao, Weimin,Zhao, Shuhong,Wu, Zhengfang. 2009

[8]Genetic Polymorphisms of the CACNA2D1 Gene and Their Association with Carcass and Meat Quality Traits in Cattle. Hou, Guan-Yu,Yuan, Zheng-Rong,Gao, Xue,Li, Jun-Ya,Gao, Hui-Jiang,Chen, Jin-Bao,Xu, Shang-Zhong,Hou, Guan-Yu. 2010

[9]An isolation, polymorphism and trait association study of bovine GAD1 and GAL genes. Guo, H.,Li, K.,Liu, W-S.,Li, H-D.,Xu, S-Z.,Ren, H-Y.,Gao, X.. 2006

[10]Molecular cloning of the HGD gene and association of SNPs with meat quality traits in Chinese red cattle. Cao, Yang,Zhang, Lichun,Jin, Haiguo,Li, Mei,Dudgeon, Crissy,Zhou, Guoli,Zhou, Guoli.

[11]Tissues expression analysis, novel SNPs of the bovine Angptl4 gene and its effects on bovine bioeconomic traits. Ma, Yun,Chen, Ningbo,Li, Rongrong,Xu, Yongjie,Li, Fen,Zheng, Xianrui,Li, Shuyuan,Zhang, Huali,Huang, Yufen,Bai, Fang,Wang, Junfang,Li, Yafang,Yang, Ting,Gao, Hanting,Wang, Xinzhuang,Li, Junya.

[12]SNP and haplotype analysis reveal IGF2 variants associated with growth traits in Chinese Qinchuan cattle. Huang, Yong-Zhen,Zhan, Zhao-Yang,Li, Xin-Yi,Wu, Sheng-Ru,Sun, Yu-Jia,Xue, Jing,Lan, Xian-Yong,Lei, Chu-Zhao,Chen, Hong,Zhang, Chun-Lei,Jia, Yu-Tang.

[13]Association analysis of HSP70A1A haplotypes with heat tolerance in Chinese Holstein cattle. Xiong, Qi,Liu, Yang,Suo, Xiaojun,Zhang, Nian,Li, Xiaofeng,Chen, Mingxin,Xiong, Haiqian,Li, Wengong,Huang, Tao,Chai, Jin,Jiang, Siwen,Chai, Jin,Jiang, Siwen.

[14]Morphological diversities and eco-geographical structuring of Ethiopian camel (Camelus dromedarius) populations. Yosef, T.,Kefelegn, K.,Mohammed, Y. K.,Mengistu, U.,Solomon, A.,Tadelle, D.,Han, J.. 2014

[15]Molecular Characterization, Gene Evolution, and Expression Analysis of the Fructose-1, 6-bisphosphate Aldolase (FBA) Gene Family in Wheat (Triticum aestivum L.). Lv, Geng-Yin,Guo, Xiao-Guang,Xie, Li-Ping,Xie, Chang-Gen,Zhang, Xiao-Hong,Yang, Yuan,Xiao, Lei,Tang, Yu-Ying,Guo, Ai-Guang,Xu, Hong,Xie, Chang-Gen,Guo, Ai-Guang,Xu, Hong,Pan, Xing-Lai. 2017

[16]MOLECULAR CHARACTERIZATION, POLYMORPHISM AND EXPRESSION ANALYSIS OF SWAMP EEL MAJOR HISTOCOMPATIBILITY COMPLEX CLASS II B GENE, AFTER INFECTION BY AEROMONAS HYDROPHILIA. Li, W.,Sun, W. X.,Hu, J. F.,Hong, D. W.,Li, W.,Chen, S. L.. 2014

[17]Major histocompatibility complex class IIA and IIB genes of Nile tilapia Oreochromis niloticus: Genomic structure, molecular polymorphism and expression patterns. Pang, Ji-cai,Gao, Feng-ying,Lu, Mai-xin,Ye, Xing,Zhu, Hua-ping,Ke, Xiao-li,Gao, Feng-ying,Lu, Mai-xin,Ye, Xing,Zhu, Hua-ping,Ke, Xiao-li,Pang, Ji-cai. 2013

[18]Molecular cloning, genomic structure, polymorphism and expression analysis of major histocompatibility complex class IIA and IIB genes of half-smooth tongue sole (Cynoglossus semilaevis). Xu, Tian-jun,Chen, Song-lin,Ji, Xiang-shan,Sha, Zhen-xia,Xu, Tian-jun.

[19]Isolation and characterization of Toll-like receptor 21 and 22 genes from Nile tilapia, Oreochromis niloticus (Linnaeus). Pang, Ji-cai,Gao, Feng-ying,Zhao, Jin-liang,Pang, Ji-cai,Gao, Feng-ying,Wang, Miao,Lu, Mai-xin,Pang, Ji-cai,Gao, Feng-ying,Wang, Miao,Lu, Mai-xin.

[20]Genomic organization and promoter characterization of FcCTL, a C-type lectin-like protein in Fenneropenaeus chinensis. Lai, XiaoFang,Gao, Huan,Yan, Binlun,Lai, XiaoFang,Gao, Huan,Kong, Jie,Wang, QingYin,Meng, XianHong,Chen, Baiyao.

作者其他论文 更多>>